RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CYP21A2P08686 494 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 PTK7Q13308 1070 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 MFSD10Q14728 455 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 ARNTL2Q8WYA1 636 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 LSG1Q9H089 658 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 ANO2Q9NQ90 1003 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 PCDHA1Q9Y5I3 950 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 PPFIA4O75335 1185 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 TRAF1Q13077 416 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 KIAA0753Q2KHM9 967 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 MYSM1Q5VVJ2 828 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 CYB5R4Q7L1T6 521 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 RALYLQ86SE5 291 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 VSIG10LQ86VR7 867 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 ALG1Q9BT22 464 aa20.33■□□□□ 0.85
SHKBP1-203ENST00000594298 ABHD14A-ACY1A0A1B0GW23 586 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 EFCAB14O75071 495 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 ZNF286BP0CG31 522 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 TGFB3P10600 412 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 TFF2Q03403 129 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 PGM5Q15124 567 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 SKIV2LQ15477 1246 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 TRIM71Q2Q1W2 868 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 CELF3Q5SZQ8 465 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 TRAF7Q6Q0C0 670 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 COG5Q9UP83 839 aa20.32■□□□□ 0.84
SHKBP1-203ENST00000594298 MYCLP12524 364 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 GRB10Q13322 594 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 HSDL1Q3SXM5 330 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 NCOA7Q8NI08 942 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 RIOX1Q9H6W3 641 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 KIAA1217Q5T5P2 1943 aa20.31■□□□□ 0.84
SHKBP1-203ENST00000594298 MYO9BQ13459 2157 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 E7EWF7 191 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 LPXNO60711 386 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 HOXA13P31271 388 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 DEFB103AP81534 67 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 GRM4Q14833 912 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 SLC35G1Q2M3R5 365 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 KRT40Q6A162 431 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 SPATA33Q96N06 139 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 LMCD1Q9NZU5 365 aa20.3■□□□□ 0.84
SHKBP1-203ENST00000594298 XIRP2A4UGR9 3374 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 ERICH2A1L162 156 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 LCHNA4D1U4 455 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 GCOM1H8Y6P7 765 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 GJB5O95377 273 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 GGPS1O95749 300 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 POLR2MP0CAP2 368 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 COL9A1P20849 921 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 UBA1P22314 1058 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 CCND2P30279 289 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 KCNQ1P51787 676 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 SP2Q02086 613 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 IKBKEQ14164 716 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 TCTN1Q2MV58 587 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 IL31RAQ8NI17 732 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 WNT8BQ93098 351 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 RAD9AQ99638 391 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 C16orf70Q9BSU1 422 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 ZBED2Q9BTP6 218 aa20.29■□□□□ 0.84
SHKBP1-203ENST00000594298 ZNF200P98182 395 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 HIC1Q14526 733 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 MBTPS1Q14703 1052 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 SPRED2Q7Z698 418 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 TMCO2Q7Z6W1 182 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 SERINC5Q86VE9 423 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 HOMER1Q86YM7 354 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 TET1Q8NFU7 2136 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 NECAB3Q96P71 396 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 PIGSQ96S52 555 aa20.28■□□□□ 0.84
SHKBP1-203ENST00000594298 EMSYQ7Z589 1322 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 SLC27A2O14975 620 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 CYTH3O43739 400 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 LGR5O75473 907 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 HOXC8P31273 242 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 TROAPQ12815 778 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 MKRN4PQ13434 485 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 CREB3L3Q68CJ9 461 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 HLA-CQ95604 372 aa20.27■□□□□ 0.84
SHKBP1-203ENST00000594298 FRMPD4Q14CM0 1322 aa20.27■□□□□ 0.83
SHKBP1-203ENST00000594298 IFIT3O14879 490 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 STAM2O75886 525 aa20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 REC8O95072 547 aa20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 ERVK-21P61565 698 aa20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 FCHSD1Q86WN1 690 aa20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 MLXIPQ9HAP2 919 aa20.26■□□□□ 0.83
SHKBP1-203ENST00000594298 TRANK1O15050 2925 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 H3BRB1 525 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 SORBS3O60504 671 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 ICAM3P32942 547 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 WTAPQ15007 396 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 GNPTABQ3T906 1256 aa20.25■□□□□ 0.83
SHKBP1-203ENST00000594298 GPKOWQ92917 476 aaPredicted RBP eCLIP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms