RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 RIT2Q99578 217 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 SENP7Q9BQF6 1050 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
SMAD4-214ENST00000592186 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 TDP2O95551 362 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 YEATS4O95619 227 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 CYP2C19P33261 490 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 PRPHP41219 470 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 NASPP49321 788 aaPredicted RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 PTGDRQ13258 359 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 NEDD9Q14511 834 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 SLC39A14Q15043 492 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 SF3A1Q15459 793 aaKnown RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 CALCRLQ16602 461 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 FAM173BQ6P4H8 233 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 CYP2W1Q8TAV3 490 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 TRIB2Q92519 343 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 LENG9Q96B70 501 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 FAM184BQ9ULE4 1060 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 MRVI1Q9Y6F6 885 aa12.08□□□□□ -0.48
SMAD4-214ENST00000592186 RBBP6Q7Z6E9 1792 aaKnown RBP12.08□□□□□ -0.48
SMAD4-214ENST00000592186 PLXNB2O15031 1838 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 RGS20O76081 388 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 TXNP10599 105 aaKnown RBP12.07□□□□□ -0.48
SMAD4-214ENST00000592186 CCDC144BQ3MJ40 725 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 TAPT1Q6NXT6 567 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 CCDC62Q6P9F0 684 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 FBXO46Q6PJ61 603 aaPredicted RBP12.07□□□□□ -0.48
SMAD4-214ENST00000592186 CLEC17AQ6ZS10 378 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 C4orf32Q8N8J7 132 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 TNPO1Q92973 898 aaKnown RBP12.07□□□□□ -0.48
SMAD4-214ENST00000592186 FERMT2Q96AC1 680 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 USP28Q96RU2 1077 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 SDF4Q9BRK5 362 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 KATNBL1Q9H079 304 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 AGO4Q9HCK5 861 aaKnown RBP12.07□□□□□ -0.48
SMAD4-214ENST00000592186 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 RCOR1Q9UKL0 485 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 ZHX1Q9UKY1 873 aaPredicted RBP12.07□□□□□ -0.48
SMAD4-214ENST00000592186 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 Q9Y3F1 56 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 CLIC4Q9Y696 253 aa12.07□□□□□ -0.48
SMAD4-214ENST00000592186 MSH4O15457 936 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 SLC37A4O43826 429 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 PPP6R2O75170 966 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 ZNF865P0CJ78 1059 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 ARP10275 920 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 AKR1A1P14550 325 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 ELNP15502 786 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 ATP2C1P98194 919 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 TNFAIP2Q03169 654 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 CEBPZQ03701 1054 aaKnown RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 CACNB2Q08289 660 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 LAMC2Q13753 1193 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 PDIA5Q14554 519 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 STK38Q15208 465 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 FOXD4L6Q3SYB3 417 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 FOXD4L3Q6VB84 417 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 DTHD1Q6ZMT9 781 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 LINC00301Q8NCQ3 95 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
SMAD4-214ENST00000592186 PTCH2Q9Y6C5 1203 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 NFASCO94856 1347 aa12.06□□□□□ -0.48
SMAD4-214ENST00000592186 MGAMO43451 1857 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 SPTLC2O15270 562 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 SEPT4O43236 478 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 MSCO60682 206 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 GAS7O60861 476 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 CYBAP13498 195 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
SMAD4-214ENST00000592186 TXKP42681 527 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 NBR1Q14596 966 aa12.05□□□□□ -0.48
SMAD4-214ENST00000592186 PTPAQ15257 358 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms