RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 CYP2W1Q8TAV3 490 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 SENP7Q9BQF6 1050 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 WDR11Q9BZH6 1224 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 MCOLN1Q9GZU1 580 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 ZHX1Q9UKY1 873 aaPredicted RBP19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 CCNT1O60563 726 aaKnown RBP19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 AKR1A1P14550 325 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 TOB1P50616 345 aaPredicted RBP19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 MTMR1Q13613 665 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 MYSM1Q5VVJ2 828 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 ZFP91Q96JP5 570 aaPredicted RBP19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 KCNH7Q9NS40 1196 aa19.37■□□□□ 0.69
RPRD1A-209ENST00000590898 NKRFO15226 690 aaKnown RBP eCLIP19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 F13A1P00488 732 aa19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 PLA2G4DQ86XP0 818 aa19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 LENG9Q96B70 501 aa19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 MRVI1Q9Y6F6 885 aa19.36■□□□□ 0.69
RPRD1A-209ENST00000590898 MSCO60682 206 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 FOXD4L6Q3SYB3 417 aaPredicted RBP19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 DUSP28Q4G0W2 176 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 PRR16Q569H4 304 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 FOXD4L3Q6VB84 417 aaPredicted RBP19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 DDX25Q9UHL0 483 aaKnown RBP19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 TDP2O95551 362 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 ADCYAP1R1P41586 468 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 TNFAIP2Q03169 654 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 SEMA3FQ13275 785 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 TTC38Q5R3I4 469 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 GIMAP8Q8ND71 665 aaPredicted RBP19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 Q9Y3F1 56 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 MYH15Q9Y2K3 1946 aa19.35■□□□□ 0.69
RPRD1A-209ENST00000590898 TBX3O15119 743 aa19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 ARP10275 920 aa19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 TXNP10599 105 aaKnown RBP19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 CNGA1P29973 690 aa19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 CCND3P30281 292 aaPredicted RBP19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 NEDD9Q14511 834 aa19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 KIAA0100Q14667 2235 aaKnown RBP19.34■□□□□ 0.69
RPRD1A-209ENST00000590898 DUSP11O75319 330 aaKnown RBP19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 ATP2B1P20020 1258 aa19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 FAM20AQ96MK3 541 aa19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 AGO4Q9HCK5 861 aaKnown RBP19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 PAK6Q9NQU5 681 aaPredicted RBP19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 GNEQ9Y223 722 aaKnown RBP19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 BRCA2P51587 3418 aa19.33■□□□□ 0.69
RPRD1A-209ENST00000590898 SMPD1P17405 629 aa19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 ATL3Q6DD88 541 aa19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 DDX20Q9UHI6 824 aaKnown RBP19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 ATP6V1DQ9Y5K8 247 aa19.33■□□□□ 0.68
RPRD1A-209ENST00000590898 DDX11L8A8MPP1 907 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 IPO5O00410 1097 aaKnown RBP19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 WNT7AO00755 349 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 SLC37A4O43826 429 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 ARIH2O95376 493 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 KCNA2P16389 499 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 SP2Q02086 613 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 TBC1D22BQ9NU19 505 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 PCDHB6Q9Y5E3 794 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 NFASCO94856 1347 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 DOCK5Q9H7D0 1870 aa19.32■□□□□ 0.68
RPRD1A-209ENST00000590898 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 MSH4O15457 936 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 NEMFO60524 1076 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 ATP9AO75110 1047 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 BMP15O95972 392 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 RARBP10826 455 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 CCL5P13501 91 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 MCM7P33993 719 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 MTFR1Q15390 333 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 ZNF174Q15697 407 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 LY6KQ17RY6 165 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 SLFN12Q8IYM2 578 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 ETNPPLQ8TBG4 499 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 SLC5A5Q92911 643 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 RIT2Q99578 217 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 ZNF577Q9BSK1 485 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 LAD1O00515 517 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 ADCY6O43306 1168 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 CAPN2P17655 700 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 UBA1P22314 1058 aaKnown RBP19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 NKX3-2P78367 333 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 LAMC2Q13753 1193 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 RNF208Q9H0X6 261 aa19.31■□□□□ 0.68
RPRD1A-209ENST00000590898 GH1P01241 217 aa19.3■□□□□ 0.68
RPRD1A-209ENST00000590898 LHX8Q68G74 356 aa19.3■□□□□ 0.68
RPRD1A-209ENST00000590898 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
RPRD1A-209ENST00000590898 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms