RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 TMEM39AQ9NV64 488 aa10.39□□□□□ -0.75
SSH2-209ENST00000579954 TMEM260Q9NX78 707 aa10.39□□□□□ -0.75
SSH2-209ENST00000579954 VPS54Q9P1Q0 977 aa10.39□□□□□ -0.75
SSH2-209ENST00000579954 DDX41Q9UJV9 622 aaKnown RBP10.39□□□□□ -0.75
SSH2-209ENST00000579954 TPCN1Q9ULQ1 816 aa10.39□□□□□ -0.75
SSH2-209ENST00000579954 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
SSH2-209ENST00000579954 FRMPD4Q14CM0 1322 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 FIBPO43427 364 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 KPNA6O60684 536 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 MMP3P08254 477 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 ZNF286BP0CG31 522 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 RAG1P15918 1043 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 IFNAR1P17181 557 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 UBA1P22314 1058 aaKnown RBP10.38□□□□□ -0.75
SSH2-209ENST00000579954 EVCP57679 992 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 NLRP5P59047 1200 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 MRPS9P82933 396 aaKnown RBP10.38□□□□□ -0.75
SSH2-209ENST00000579954 PURAQ00577 322 aaKnown RBP10.38□□□□□ -0.75
SSH2-209ENST00000579954 LAMC2Q13753 1193 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 DGKDQ16760 1214 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 CCDC62Q6P9F0 684 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 ALG1Q9BT22 464 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 C22orf23Q9BZE7 217 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 KAT6AQ92794 2004 aa10.38□□□□□ -0.75
SSH2-209ENST00000579954 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 DTNBO60941 627 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 RGS20O76081 388 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 DEXIO95424 95 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
SSH2-209ENST00000579954 GNA11P29992 359 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 FOSBP53539 338 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 NKX3-2P78367 333 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 SCRN1Q12765 414 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 AP3B2Q13367 1082 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 MTMR1Q13613 665 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 NEDD9Q14511 834 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 NTRK3Q16288 839 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 PKN1Q16512 942 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 CELF3Q5SZQ8 465 aaKnown RBP10.37□□□□□ -0.75
SSH2-209ENST00000579954 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 CYFIP1Q7L576 1253 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 REXO1Q8N1G1 1221 aaKnown RBP10.37□□□□□ -0.75
SSH2-209ENST00000579954 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
SSH2-209ENST00000579954 CEP290O15078 2479 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 TRIM43BA6NCK2 446 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 A6NJR5 290 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 PFKFB2O60825 505 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 TGFB3P10600 412 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 XBP1P17861 261 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 SP2Q02086 613 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 FAAP100Q0VG06 881 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 HABP4Q5JVS0 413 aaKnown RBP10.36□□□□□ -0.75
SSH2-209ENST00000579954 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
SSH2-209ENST00000579954 XRRA1Q6P2D8 792 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 ANKRD33Q7Z3H0 272 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 FAM126BQ8IXS8 530 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 PPTC7Q8NI37 304 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 BICD2Q8TD16 824 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 BADQ92934 168 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 TRIM43Q96BQ3 446 aaPredicted RBP10.36□□□□□ -0.75
SSH2-209ENST00000579954 GPRASP2Q96D09 838 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 CDHR1Q96JP9 859 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 KATNAL1Q9BW62 490 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 TANC1Q9C0D5 1861 aa10.36□□□□□ -0.75
SSH2-209ENST00000579954 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 DDX39AO00148 427 aaKnown RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 B4GALT4O60513 344 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 LARGE1O95461 756 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 MFSD10Q14728 455 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 ME3Q16798 604 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 MYSM1Q5VVJ2 828 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 C7orf31Q8N865 590 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 GIMAP8Q8ND71 665 aaPredicted RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 AIFM3Q96NN9 605 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 SDF4Q9BRK5 362 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 ZMYND12Q9H0C1 365 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 TRPV6Q9H1D0 765 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 JADE2Q9NQC1 790 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 TRMT13Q9NUP7 481 aaKnown RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 ORC3Q9UBD5 711 aaPredicted RBP10.35□□□□□ -0.75
SSH2-209ENST00000579954 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
SSH2-209ENST00000579954 ESYT2A0FGR8 921 aa10.34□□□□□ -0.75
SSH2-209ENST00000579954 ITGB5P18084 799 aa10.34□□□□□ -0.75
SSH2-209ENST00000579954 ICAM3P32942 547 aa10.34□□□□□ -0.75
SSH2-209ENST00000579954 PSEN2P49810 448 aa10.34□□□□□ -0.75
SSH2-209ENST00000579954 CDK7P50613 346 aa10.34□□□□□ -0.75
SSH2-209ENST00000579954 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms