RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 XDHP47989 1333 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 TTLL1O95922 423 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 TRPC3Q13507 836 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 GAS8O95995 478 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CTAGE3PQ8IX95 158 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 MAP2K2P36507 400 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CPDO75976 1380 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 PPFIA4O75335 1185 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 ABCB5Q2M3G0 1257 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 TAOK1Q7L7X3 1001 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■■□□□ 14.1
ERBB2-206ENST00000578373 STIM2Q9P246 746 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CDC42BPGQ6DT37 1551 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 POTECB2RU33 542 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 STRN3Q13033 797 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 ANKRD40Q6AI12 368 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
ERBB2-206ENST00000578373 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
ERBB2-206ENST00000578373 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 LAD1O00515 517 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 TXNDC16Q9P2K2 825 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 PALLDQ8WX93 1383 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 A6NNZ2 444 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 H0YIN7 160 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 THAP12O43422 761 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 SERPINB2P05120 415 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 ARL1P40616 181 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 STAT3P40763 770 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 KLK7P49862 253 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 STK4Q13043 487 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 RASA3Q14644 834 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 TRIM7Q9C029 511 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 DDX47Q9H0S4 455 aaKnown RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 METTL14Q9HCE5 456 aaKnown RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 INTS9Q9NV88 658 aaKnown RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 NR1D1P20393 614 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-206ENST00000578373 SLFN12Q8IYM2 578 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 CSRNP1Q96S65 589 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
ERBB2-206ENST00000578373 TMOD1P28289 359 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 HSPA1LP34931 641 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 ALX1Q15699 326 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 MIGA2Q7L4E1 593 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 MS4A14Q96JA4 679 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 SEMA3EO15041 775 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-206ENST00000578373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-206ENST00000578373 A0A1B0GTH6 734 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 FGGP02679 453 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 SESN3P58005 492 aa13.12□□□□□ -0.31
ERBB2-206ENST00000578373 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms