RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PRUNE2Q8WUY3 3088 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.89■□□□□ 0.29
FANCA-220ENST00000566409 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.89■□□□□ 0.29
FANCA-220ENST00000566409 GRXCR1A8MXD5 290 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 HAS3O00219 553 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 KRT32Q14532 448 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 GDF6Q6KF10 455 aaPredicted RBP16.89■□□□□ 0.29
FANCA-220ENST00000566409 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
FANCA-220ENST00000566409 KCNV1Q6PIU1 500 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 HERVK_113Q902F9 699 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
FANCA-220ENST00000566409 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 SPATA31C2B4DYI2 1134 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 RBAK-RBAKDNI3L0D1 243 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 F2P00734 622 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 CDC27P30260 824 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 ICAM3P32942 547 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 PSEN2P49810 448 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 ZNF697Q5TEC3 545 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 PSTPIP2Q9H939 334 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 HDAC6Q9UBN7 1215 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
FANCA-220ENST00000566409 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 ZBTB43O43298 467 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 FGBP02675 491 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 PBX2P40425 430 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 HIC1Q14526 733 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 PTGISQ16647 500 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 UBE2SQ16763 222 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 RTN1Q16799 776 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 OTOP2Q7RTS6 562 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 DHX38Q92620 1227 aaKnown RBP16.87■□□□□ 0.29
FANCA-220ENST00000566409 CDX2Q99626 313 aaPredicted RBP16.87■□□□□ 0.29
FANCA-220ENST00000566409 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 GTF2IRD1Q9UHL9 959 aa16.87■□□□□ 0.29
FANCA-220ENST00000566409 CUL9Q8IWT3 2517 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 STAM2O75886 525 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
FANCA-220ENST00000566409 IQCF3P0C7M6 154 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 MFSD10Q14728 455 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 KIAA0753Q2KHM9 967 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 CUL5Q93034 780 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 JAKMIP1Q96N16 626 aaKnown RBP16.86■□□□□ 0.29
FANCA-220ENST00000566409 ALG1Q9BT22 464 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 PBX4Q9BYU1 374 aa16.86■□□□□ 0.29
FANCA-220ENST00000566409 RBM28Q9NW13 759 aaKnown RBP16.86■□□□□ 0.29
FANCA-220ENST00000566409 DNAJB2P25686 324 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
FANCA-220ENST00000566409 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
FANCA-220ENST00000566409 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 GPNMBQ14956 572 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 GNPTABQ3T906 1256 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 XRRA1Q6P2D8 792 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 Q6ZUG5 572 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 DEFB128Q7Z7B8 93 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
FANCA-220ENST00000566409 MLXIPQ9HAP2 919 aa16.85■□□□□ 0.29
FANCA-220ENST00000566409 V9GY48 417 aaPredicted RBP16.85■□□□□ 0.29
FANCA-220ENST00000566409 GOLGA8AA7E2F4 631 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 GOLGA8BA8MQT2 603 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 FIBPO43427 364 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 ATP9AO75110 1047 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 ITGB5P18084 799 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 C7orf31Q8N865 590 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 WNT8BQ93098 351 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 NOD1Q9Y239 953 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 TRANK1O15050 2925 aa16.84■□□□□ 0.29
FANCA-220ENST00000566409 TMEM265A0A087WTH1 108 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 STXBP3O00186 592 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 LGALS2P05162 132 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 NEFLP07196 543 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 RCAN1P53805 252 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 PTPRSQ13332 1948 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 BFSP2Q13515 415 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 NEDD9Q14511 834 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 GRIN2CQ14957 1233 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 TRIM71Q2Q1W2 868 aaKnown RBP16.83■□□□□ 0.28
FANCA-220ENST00000566409 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 METTL7BQ6UX53 244 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 FBXL16Q8N461 479 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 BRF1Q92994 677 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 TIFAQ96CG3 184 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 GPR20Q99678 358 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 KATNAL1Q9BW62 490 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms