RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.36
LINC00560-201ENST00000564593 CABP5Q9NP86 173 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 ADAMTS6Q9UKP5 1117 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 COA3Q9Y2R0 106 aaPredicted RBP6.52□□□□□ -1.36
LINC00560-201ENST00000564593 X6R8D5 127 aa6.52□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 MSL3P1P0C860 447 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 GNAT1P11488 350 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 TACR1P25103 407 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 MVKQ03426 396 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 SART3Q15020 963 aaKnown RBP6.52□□□□□ -1.37
LINC00560-201ENST00000564593 DHCR24Q15392 516 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 NR0B2Q15466 257 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 CBLL1Q75N03 491 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 OVCH1Q7RTY7 1134 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 KIF18BQ86Y91 864 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 Q8N1Y9 231 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 PRPF38AQ8NAV1 312 aaKnown RBP6.52□□□□□ -1.37
LINC00560-201ENST00000564593 OR2W6PQ8NHA6 318 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 ORAI3Q9BRQ5 295 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
LINC00560-201ENST00000564593 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 ACSL6Q9UKU0 697 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 CBLCQ9ULV8 474 aa6.52□□□□□ -1.37
LINC00560-201ENST00000564593 CBX4O00257 560 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 PSPNO60542 156 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 DGKIO75912 1065 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 HPXP02790 462 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
LINC00560-201ENST00000564593 CDKN1CP49918 316 aaPredicted RBP6.51□□□□□ -1.37
LINC00560-201ENST00000564593 EVA1CP58658 441 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 MROH9Q5TGP6 573 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 NXPE1Q8N323 547 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
LINC00560-201ENST00000564593 USP7Q93009 1102 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 EPB41L1Q9H4G0 881 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 FBLN5Q9UBX5 448 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 GPR160Q9UJ42 338 aa6.51□□□□□ -1.37
LINC00560-201ENST00000564593 ZNF891A8MT65 544 aaPredicted RBP6.5□□□□□ -1.37
LINC00560-201ENST00000564593 TRAF5O00463 557 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 GAS7O60861 476 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 EYA4O95677 639 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 F2P00734 622 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 COL6A2P12110 1019 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 RAC2P15153 192 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 PDE6AP16499 860 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 TRHRP34981 398 aaPredicted RBP6.5□□□□□ -1.37
LINC00560-201ENST00000564593 CYP4F8P98187 520 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
LINC00560-201ENST00000564593 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 OSTM1Q86WC4 334 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 C2orf69Q8N8R5 385 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 CHST14Q8NCH0 376 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 MYLIPQ8WY64 445 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 SP110Q9HB58 689 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 HOMER2Q9NSB8 354 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 DDX56Q9NY93 547 aaKnown RBP6.5□□□□□ -1.37
LINC00560-201ENST00000564593 ZKSCAN5Q9Y2L8 839 aa6.5□□□□□ -1.37
LINC00560-201ENST00000564593 ITGB5P18084 799 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 KRT15P19012 456 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 MECP2P51608 486 aaKnown RBP6.49□□□□□ -1.37
LINC00560-201ENST00000564593 TIGD5Q53EQ6 642 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 OTOP3Q7RTS5 596 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 CABP7Q86V35 215 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 RIOX2Q8IUF8 465 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 LILRA2Q8N149 483 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 TTC1Q99614 292 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 B4GALT6Q9UBX8 382 aa6.49□□□□□ -1.37
LINC00560-201ENST00000564593 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 RAB11FIP3O75154 756 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 EFEMP2O95967 443 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 NTRK1P04629 796 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 JUNBP17275 347 aaPredicted RBP6.48□□□□□ -1.37
LINC00560-201ENST00000564593 JAM2P57087 298 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 LACTBP83111 547 aaPredicted RBP6.48□□□□□ -1.37
LINC00560-201ENST00000564593 SNX17Q15036 470 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 GPR19Q15760 415 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 BICRALQ6AI39 1079 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 ARHGAP36Q6ZRI8 547 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 SIRT2Q8IXJ6 389 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 WDR66Q8TBY9 1149 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 IFT22Q9H7X7 185 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 RC3H2Q9HBD1 1191 aaKnown RBP6.48□□□□□ -1.37
LINC00560-201ENST00000564593 CTNND2Q9UQB3 1225 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 KRIT1O00522 736 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 NKRFO15226 690 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC00560-201ENST00000564593 BRINP1O60477 761 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 ARL4AP40617 200 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 GALK1P51570 392 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 IL2P60568 153 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 DSG1Q02413 1049 aa6.48□□□□□ -1.37
LINC00560-201ENST00000564593 FAM50AQ14320 339 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms