RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 MMP1P03956 469 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 FOSBP53539 338 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 NECAB2Q7Z6G3 386 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 GPRASP2Q96D09 838 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 C8orf76Q96K31 380 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 TSEN34Q9BSV6 310 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 C11orf49Q9H6J7 331 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 BTBD18B2RXH4 712 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 KBTBD13C9JR72 458 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 MAFGO15525 162 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 ATP9AO75110 1047 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 GH1P01241 217 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 UBA1P22314 1058 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 CIITAP33076 1130 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 USP11P51784 963 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 ACLYP53396 1101 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 GUCY1B3Q02153 619 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 ARHGAP1Q07960 439 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 NR5A1Q13285 461 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 MTMR1Q13613 665 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 TRIM29Q14134 588 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 FSCN1Q16658 493 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 EARS2Q5JPH6 523 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 CELF3Q5SZQ8 465 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 FBXO18Q8NFZ0 1043 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 TBCKQ8TEA7 893 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-218ENST00000560777 MOXD2PA6NHM9 499 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 A6NJR5 290 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 SORBS3O60504 671 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 GGPS1O95749 300 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 ASGR1P07306 291 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 ARP10275 920 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 GJB2P29033 226 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 KRT2P35908 639 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 ZNF76P36508 570 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 LAMC2Q13753 1193 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 DHX37Q8IY37 1157 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 AFG1LQ8WV93 481 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 FERMT2Q96AC1 680 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 CDHR1Q96JP9 859 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 KCNH7Q9NS40 1196 aa13.61□□□□□ -0.23
RABGGTA-218ENST00000560777 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 KCNA2P16389 499 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 CPT1AP50416 773 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 NEDD9Q14511 834 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 INF2Q27J81 1249 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 CYFIP1Q7L576 1253 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 MLXIPQ9HAP2 919 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 BRMS1Q9HCU9 246 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
RABGGTA-218ENST00000560777 CYP3A7-CYP3A51PA0A087WV96 503 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 A0A1W2PQ45 241 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 A0A1W2PQY0 241 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 ZEB2O60315 1214 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 CYP3A7P24462 503 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 PRR16Q569H4 304 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 METTL7BQ6UX53 244 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 SLC39A5Q6ZMH5 540 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 PPTC7Q8NI37 304 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 LENG9Q96B70 501 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 SPATA33Q96N06 139 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 AGO4Q9HCK5 861 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
RABGGTA-218ENST00000560777 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.23
RABGGTA-218ENST00000560777 PPFIA4O75335 1185 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 MMP3P08254 477 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 MLLT1Q03111 559 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 ITGB3BPQ13352 177 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms