RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 TRIM55Q9BYV6 548 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 EDC4Q6P2E9 1401 aaKnown RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 DRP2Q13474 957 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 GINS2Q9Y248 185 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 STAT2P52630 851 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 RARS2Q5T160 578 aaKnown RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 CCPG1Q9ULG6 757 aa11.72□□□□□ -0.53
SPTB-208ENST00000556626 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
SPTB-208ENST00000556626 SERPING1P05155 500 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 PYGBP11216 843 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
SPTB-208ENST00000556626 NR2F2P24468 414 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 LPIN2Q92539 896 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 FAM8A1Q9UBU6 413 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 WARS2Q9UGM6 360 aaKnown RBP11.71□□□□□ -0.53
SPTB-208ENST00000556626 MFAP3P55082 362 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 FSCBQ5H9T9 825 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 C11orf57Q6ZUT1 292 aaPredicted RBP11.71□□□□□ -0.53
SPTB-208ENST00000556626 CENPUQ71F23 418 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 OSBPL1AQ9BXW6 950 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 CA4P22748 312 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 PSMD7P51665 324 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 ZNF658Q5TYW1 1059 aaPredicted RBP11.71□□□□□ -0.53
SPTB-208ENST00000556626 FAM186BQ8IYM0 893 aa11.71□□□□□ -0.53
SPTB-208ENST00000556626 PRDM1O75626 825 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 ACRBPQ8NEB7 543 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 MMS19Q96T76 1030 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 PSTPIP2Q9H939 334 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 NDE1Q9NXR1 346 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 MYO18AQ92614 2054 aaKnown RBP11.71□□□□□ -0.54
SPTB-208ENST00000556626 STXBP3O00186 592 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 MOCS3O95396 460 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 GFAPP14136 432 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 HOXA7P31268 230 aaPredicted RBP11.71□□□□□ -0.54
SPTB-208ENST00000556626 OCRLQ01968 901 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 PPARAQ07869 468 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 DEPTORQ8TB45 409 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 RUBCNQ92622 972 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 NPR1P16066 1061 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 TMCO5AQ8N6Q1 288 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 KCTD6Q8NC69 237 aa11.71□□□□□ -0.54
SPTB-208ENST00000556626 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.54
SPTB-208ENST00000556626 A0A0G2JND7 137 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 GMNCA6NCL1 334 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TMOD1P28289 359 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TTC25Q96NG3 672 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 MED10Q9BTT4 135 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 SERPINI2O75830 405 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 SCG2P13521 617 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 NLRX1Q86UT6 975 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 DISC1Q9NRI5 854 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 CALR3Q96L12 384 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 CXorf56Q9H5V9 222 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TLK1Q9UKI8 766 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 SKOR1P84550 965 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 CFBP00751 764 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 PYGLP06737 847 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 CNGA3Q16281 694 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 RFX6Q8HWS3 928 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 ZNF653Q96CK0 615 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 ELAC2Q9BQ52 826 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 CATSPER1Q8NEC5 780 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 SLC4A7Q9Y6M7 1214 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 RASA4BC9J798 803 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 RASA4O43374 803 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 SERPINB2P05120 415 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 NGLY1Q96IV0 654 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 DBNLQ9UJU6 430 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
SPTB-208ENST00000556626 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
SPTB-208ENST00000556626 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms