RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MAPKBP1O60336 1514 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 BIN1O00499 593 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 GSTA4O15217 222 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 PDE8AO60658 829 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 DBHP09172 617 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 ITGB5P18084 799 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 NCLP19338 710 aaKnown RBP4.79□□□□□ -1.64
SRP54-209ENST00000555746 FLT3P36888 993 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 SLC6A11P48066 632 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 FAM47CQ5HY64 1035 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 EMC4Q5J8M3 183 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 WWC2Q6AWC2 1192 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 FILIP1Q7Z7B0 1213 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 ZC3H7AQ8IWR0 971 aaKnown RBP4.79□□□□□ -1.64
SRP54-209ENST00000555746 AHI1Q8N157 1196 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 Q8N3U1 123 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 PANK1Q8TE04 598 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 FBXW5Q969U6 566 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 MTFR1LQ9H019 292 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 BTG4Q9NY30 223 aa4.79□□□□□ -1.64
SRP54-209ENST00000555746 COA3Q9Y2R0 106 aaPredicted RBP4.79□□□□□ -1.64
SRP54-209ENST00000555746 AQRO60306 1485 aaKnown RBP eCLIP4.79□□□□□ -1.647e-11■■■■□ 23.2
SRP54-209ENST00000555746 DGKIO75912 1065 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 PAPLNO95428 1278 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 CYBBP04839 570 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 GLI1P08151 1106 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 JMJD7P0C870 316 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 TACR1P25103 407 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 LACTBP83111 547 aaPredicted RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 NR1I3Q14994 352 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 CDCA2Q69YH5 1023 aaPredicted RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 CYP4F22Q6NT55 531 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 CNNM4Q6P4Q7 775 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 OTOP3Q7RTS5 596 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 NBPF11Q86T75 865 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 DDX53Q86TM3 631 aaKnown RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 CABP7Q86V35 215 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 IRF2BP1Q8IU81 584 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 USP33Q8TEY7 942 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.78□□□□□ -1.64
SRP54-209ENST00000555746 INTS4Q96HW7 963 aaKnown RBP4.78□□□□□ -1.64
SRP54-209ENST00000555746 JAM3Q9BX67 310 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 SLC6A17Q9H1V8 727 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 CAAP1Q9H8G2 361 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
SRP54-209ENST00000555746 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 CCDC66A2RUB6 948 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 TADA3O75528 432 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 GLRX3O76003 335 aaKnown RBP4.77□□□□□ -1.65
SRP54-209ENST00000555746 NTRK1P04629 796 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 SRGAP2CP0DJJ0 459 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 PYGMP11217 842 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 JUNBP17275 347 aaPredicted RBP4.77□□□□□ -1.65
SRP54-209ENST00000555746 SOX5P35711 763 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 GALK1P51570 392 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 SPIRE1Q08AE8 756 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 CFAP100Q494V2 611 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 BICRALQ6AI39 1079 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 PAQR3Q6TCH7 311 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 ZSWIM9Q86XI8 627 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 DCP2Q8IU60 420 aaKnown RBP4.77□□□□□ -1.65
SRP54-209ENST00000555746 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 CHAC2Q8WUX2 184 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 SEC14L1Q92503 715 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 PDGFDQ9GZP0 370 aaPredicted RBP4.77□□□□□ -1.65
SRP54-209ENST00000555746 SAMD15Q9P1V8 674 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 CBLCQ9ULV8 474 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 COQ6Q9Y2Z9 468 aa4.77□□□□□ -1.65
SRP54-209ENST00000555746 HRKO00198 91 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 CBX4O00257 560 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 SGSM2O43147 1006 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 MPOP05164 745 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 GNAT1P11488 350 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 YBX1P67809 324 aaKnown RBP4.76□□□□□ -1.65
SRP54-209ENST00000555746 ST5P78524 1137 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 PCBP1Q15365 356 aaKnown RBP eCLIP4.76□□□□□ -1.65
SRP54-209ENST00000555746 GPR19Q15760 415 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 CRY1Q16526 586 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 PTPROQ16827 1216 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 PIK3R6Q5UE93 754 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 PKN3Q6P5Z2 889 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 OTOP1Q7RTM1 612 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 SIRT2Q8IXJ6 389 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 UHMK1Q8TAS1 419 aaKnown RBP4.76□□□□□ -1.65
SRP54-209ENST00000555746 ZCRB1Q8TBF4 217 aaKnown RBP4.76□□□□□ -1.65
SRP54-209ENST00000555746 GPATCH3Q96I76 525 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 KCNJ15Q99712 375 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 NUDT5Q9UKK9 219 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 ZNF652Q9Y2D9 606 aa4.76□□□□□ -1.65
SRP54-209ENST00000555746 PTPRMP28827 1452 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms