RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 MFSD10Q14728 455 aa20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 AFAP1L1Q8TED9 768 aa20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 SLC28A3Q9HAS3 691 aa20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 HDAC6Q9UBN7 1215 aa20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 SEC63Q9UGP8 760 aaKnown RBP20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 YBX2Q9Y2T7 364 aaKnown RBP20.27■□□□□ 0.83
SDR39U1-206ENST00000553930 HAS3O00219 553 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 CALM1P0DP23 149 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 CALM2P0DP24 149 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 CALM3P0DP25 149 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 RABGGTBP53611 331 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 COL9A3Q14050 684 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 KIAA0753Q2KHM9 967 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 HSDL1Q3SXM5 330 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 GNPTABQ3T906 1256 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 ZFP91Q96JP5 570 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 GAS2L1Q99501 681 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 FTOQ9C0B1 505 aaKnown RBP eCLIP20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 PRDM12Q9H4Q4 367 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 PCDHA11Q9Y5I1 949 aa20.26■□□□□ 0.83
SDR39U1-206ENST00000553930 SORBS3O60504 671 aa20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 MRPS9P82933 396 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 DHX38Q92620 1227 aaKnown RBP20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 GPKOWQ92917 476 aaPredicted RBP eCLIP20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 CUL5Q93034 780 aa20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 MLXIPQ9HAP2 919 aa20.25■□□□□ 0.83
SDR39U1-206ENST00000553930 PIK3CDO00329 1044 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 RBL2Q08999 1139 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 RNF20Q5VTR2 975 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 INPP4AQ96PE3 977 aaPredicted RBP20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
SDR39U1-206ENST00000553930 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 MEIS2O14770 477 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 PARNO95453 639 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 SELPP16109 830 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 RXRAP19793 462 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 ICAM3P32942 547 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 PTK7Q13308 1070 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 USP17L6PQ6QN14 398 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 LRRC8DQ7L1W4 858 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 CMTR1Q8N1G2 835 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 PHOSPHO2Q8TCD6 241 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 SLC9A7Q96T83 725 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 C16orf70Q9BSU1 422 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
SDR39U1-206ENST00000553930 SPATA31C2B4DYI2 1134 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 FIBPO43427 364 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 BAIAP3O94812 1187 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 CKBP12277 381 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 MYOGP15173 224 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 NEDD9Q14511 834 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 PCNX4Q63HM2 1172 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 PPP2R2DQ66LE6 453 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 XRRA1Q6P2D8 792 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 SGMS1Q86VZ5 419 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 COL25A1Q9BXS0 654 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
SDR39U1-206ENST00000553930 SPTBN5Q9NRC6 3674 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 NOP56O00567 594 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 GPNMBQ14956 572 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 METTL7BQ6UX53 244 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 USP38Q8NB14 1042 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 BCAS3Q9H6U6 928 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
SDR39U1-206ENST00000553930 H3BRB1 525 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 SEMA3FQ13275 785 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 ADGRE1Q14246 886 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 TMTC3Q6ZXV5 915 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 RAB11FIP4Q86YS3 637 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 NEK1Q96PY6 1258 aa20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 TUT1Q9H6E5 874 aaKnown RBP20.2■□□□□ 0.82
SDR39U1-206ENST00000553930 SCN5AQ14524 2016 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 CUL9Q8IWT3 2517 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 CXCL10P02778 98 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 LGALS2P05162 132 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 ZNF200P98182 395 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 TRIM71Q2Q1W2 868 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 SYNE3Q6ZMZ3 975 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 CYFIP1Q7L576 1253 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 MICU3Q86XE3 530 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 SENP7Q9BQF6 1050 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
SDR39U1-206ENST00000553930 NBNO60934 754 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 CDC45O75419 566 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 CA3P07451 260 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 IGFBP4P22692 258 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 KCNJ6P48051 423 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 HIC1Q14526 733 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
SDR39U1-206ENST00000553930 NLRX1Q86UT6 975 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms