RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 GPM6BQ13491 265 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 TCTN1Q2MV58 587 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 FBXO11Q86XK2 927 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 TICAM2Q86XR7 235 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 DBF4BQ8NFT6 615 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-212ENST00000550880 SEPT8Q92599 483 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
PFDN5-212ENST00000550880 KAT14Q9H8E8 782 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 ZMYM6O95789 1325 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 PIEZO1Q92508 2521 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 C17orf102A2RUQ5 167 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 H3BNC9 293 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 CFBP00751 764 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
PFDN5-212ENST00000550880 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-212ENST00000550880 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
PFDN5-212ENST00000550880 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 PNMA1Q8ND90 353 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-212ENST00000550880 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 NSUN3Q9H649 340 aaKnown RBP12.92□□□□□ -0.34
PFDN5-212ENST00000550880 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
PFDN5-212ENST00000550880 ZNF213O14771 459 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 UPP2O95045 317 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-212ENST00000550880 MBTPS1Q14703 1052 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 CELF3Q5SZQ8 465 aaKnown RBP12.91□□□□□ -0.34
PFDN5-212ENST00000550880 TRAF7Q6Q0C0 670 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 SERINC5Q86VE9 423 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 MFSD14AQ96MC6 490 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 POP1Q99575 1024 aaKnown RBP12.91□□□□□ -0.34
PFDN5-212ENST00000550880 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 MLXIPQ9HAP2 919 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
PFDN5-212ENST00000550880 MAP3K20Q9NYL2 800 aaKnown RBP12.91□□□□□ -0.34
PFDN5-212ENST00000550880 SIP14410 1827 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 BRWD1Q9NSI6 2320 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 CAND2O75155 1236 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 PARP1P09874 1014 aaKnown RBP12.9□□□□□ -0.34
PFDN5-212ENST00000550880 TGFB3P10600 412 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 GNAT1P11488 350 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-212ENST00000550880 NHLH1Q02575 133 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 QRICH1Q2TAL8 776 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 TCEAL5Q5H9L2 206 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 ADHFE1Q8IWW8 467 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 APBB2Q92870 758 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 WNT8BQ93098 351 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 CLDND1Q9NY35 253 aa12.9□□□□□ -0.34
PFDN5-212ENST00000550880 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 GGPS1O95749 300 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 ZP2Q05996 745 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 TRAF1Q13077 416 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 IFIH1Q9BYX4 1025 aaKnown RBP12.89□□□□□ -0.35
PFDN5-212ENST00000550880 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
PFDN5-212ENST00000550880 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 H3BRB1 525 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 NOP56O00567 594 aaKnown RBP12.88□□□□□ -0.35
PFDN5-212ENST00000550880 SORBS3O60504 671 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 RB1P06400 928 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 CCND2P30279 289 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 HSD17B4P51659 736 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-212ENST00000550880 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 FIBCD1Q8N539 461 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-212ENST00000550880 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 C16orf70Q9BSU1 422 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-212ENST00000550880 LMAN2LQ9H0V9 348 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
PFDN5-212ENST00000550880 JMJD4Q9H9V9 463 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
PFDN5-212ENST00000550880 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
PFDN5-212ENST00000550880 KDM4AO75164 1064 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms