RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PTPN21Q16825 1174 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 GFOD2Q3B7J2 385 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 ACBD5Q5T8D3 534 aaPredicted RBP7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 IQSEC1Q6DN90 963 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 TSHZ1Q6ZSZ6 1077 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 MTDHQ86UE4 582 aaKnown RBP7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 PPIL6Q8IXY8 311 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 IFNL3Q8IZI9 196 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 IGSF22Q8N9C0 903 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 DSCC1Q9BVC3 393 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 PHF20Q9BVI0 1012 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 ST14Q9Y5Y6 855 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 SPATA31A6Q5VVP1 1343 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 NCOA3Q9Y6Q9 1424 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 TRPM2O94759 1503 aa7.91□□□□□ -1.14
TGFBR1-208ENST00000550253 LCE2BO14633 110 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 APPP05067 770 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 ABCB5Q2M3G0 1257 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 BRINP3Q76B58 766 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 TCF7L1Q9HCS4 588 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 VTA1Q9NP79 307 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 EMC7Q9NPA0 242 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 LUC7LQ9NQ29 371 aaKnown RBP7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 PRDM10Q9NQV6 1147 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 IP6K2Q9UHH9 426 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 MINPP1Q9UNW1 487 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 CNTNAP4Q9C0A0 1308 aa7.9□□□□□ -1.14
TGFBR1-208ENST00000550253 FZD9O00144 591 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 LSSP48449 732 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 POU4F1Q01851 419 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 OS9Q13438 667 aaPredicted RBP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 ATP13A4Q4VNC1 1196 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 CXorf57Q6NSI4 855 aaKnown RBP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 PPP4R4Q6NUP7 873 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 DGKHQ86XP1 1220 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 TMEM130Q8N3G9 435 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 TRIM11Q96F44 468 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 FUBP3Q96I24 572 aaKnown RBP eCLIP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 GPR101Q96P66 508 aaPredicted RBP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 MPHOSPH6Q99547 160 aaKnown RBP7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 SLC13A1Q9BZW2 595 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 SEMA6CQ9H3T2 930 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 GPRC5CQ9NQ84 441 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 CHST7Q9NS84 486 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 B4GALT6Q9UBX8 382 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 COQ6Q9Y2Z9 468 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 DAGLAQ9Y4D2 1042 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 RGS12O14924 1447 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 MST1RQ04912 1400 aa7.89□□□□□ -1.15
TGFBR1-208ENST00000550253 SETBP1Q9Y6X0 1596 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CDK12Q9NYV4 1490 aaPredicted RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CREB3O43889 395 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 MSCO60682 206 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 GAS7O60861 476 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 PRAMEF1O95521 474 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 EOMESO95936 686 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 RAB6AP20340 208 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CTSKP43235 329 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 PREPP48147 710 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 MECP2P51608 486 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CDPF1Q6NVV7 123 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 SLC4A10Q6U841 1118 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 KSR2Q6VAB6 950 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CCDC103Q8IW40 242 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 ZC3H7AQ8IWR0 971 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 AGGF1Q8N302 714 aaeCLIP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 PCDH19Q8TAB3 1148 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 DDX17Q92841 729 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 C19orf44Q9H6X5 657 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 ENAMQ9NRM1 1142 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 SPTLC3Q9NUV7 552 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 RNF112Q9ULX5 631 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 LUC7L2Q9Y383 392 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 SPHKAPQ2M3C7 1700 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 SETD5Q9C0A6 1442 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 AFF2P51816 1311 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 F8W735 103 aaPredicted RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 STXBP3O00186 592 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 AURKAO14965 403 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 DYNC1LI2O43237 492 aaPredicted RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 LDHAP00338 332 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 IARSP41252 1262 aaKnown RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 FAPQ12884 760 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 ZNF772Q68DY9 489 aaPredicted RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 TMED8Q6PL24 325 aaPredicted RBP7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 LBX2Q6XYB7 198 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 TPH2Q8IWU9 490 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 CHTF18Q8WVB6 975 aa7.88□□□□□ -1.15
TGFBR1-208ENST00000550253 Q96M66 194 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1251 ms