RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 WASF1Q92558 559 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 GPRASP2Q96D09 838 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 HTATIP2Q9BUP3 242 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 SENP6Q9GZR1 1112 aaPredicted RBP21.87■■□□□ 1.09
DDX55-211ENST00000544429 GJB4Q9NTQ9 266 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 RTEL1Q9NZ71 1219 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 A0A1W2PQ45 241 aaPredicted RBP21.86■■□□□ 1.09
DDX55-211ENST00000544429 A0A1W2PQY0 241 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 EDIL3O43854 480 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 GH1P01241 217 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 ASGR1P07306 291 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
DDX55-211ENST00000544429 MCM2P49736 904 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 MYSM1Q5VVJ2 828 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 OR6J1Q8NGC5 347 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 RASGRP4Q8TDF6 673 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 ALG1Q9BT22 464 aa21.86■■□□□ 1.09
DDX55-211ENST00000544429 HOXD8P13378 290 aaPredicted RBP21.85■■□□□ 1.09
DDX55-211ENST00000544429 CPT1AP50416 773 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 ARHGAP4P98171 946 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 LRRC26Q2I0M4 334 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 CELF3Q5SZQ8 465 aaKnown RBP21.85■■□□□ 1.09
DDX55-211ENST00000544429 BLIDQ8IZY5 108 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 TMX3Q96JJ7 454 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 SENP7Q9BQF6 1050 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 JADE2Q9NQC1 790 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 KCNJ14Q9UNX9 436 aa21.85■■□□□ 1.09
DDX55-211ENST00000544429 ELP1O95163 1332 aa21.84■■□□□ 1.09
DDX55-211ENST00000544429 MAFGO15525 162 aa21.84■■□□□ 1.09
DDX55-211ENST00000544429 MYCNP04198 464 aaPredicted RBP21.84■■□□□ 1.09
DDX55-211ENST00000544429 SLC39A5Q6ZMH5 540 aa21.84■■□□□ 1.09
DDX55-211ENST00000544429 MXRA8Q9BRK3 442 aa21.84■■□□□ 1.09
DDX55-211ENST00000544429 IGLV3-22A0A075B6J6 115 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 MEIS1O00470 390 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 KCNA2P16389 499 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 XBP1P17861 261 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 CIITAP33076 1130 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 PURAQ00577 322 aaKnown RBP21.83■■□□□ 1.09
DDX55-211ENST00000544429 LAMC2Q13753 1193 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 CEP55Q53EZ4 464 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 NIPA1Q7RTP0 329 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 NLRX1Q86UT6 975 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 PPTC7Q8NI37 304 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 CYP2W1Q8TAV3 490 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 AFG1LQ8WV93 481 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 FERMT2Q96AC1 680 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 CDHR1Q96JP9 859 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 BCAS3Q9H6U6 928 aa21.83■■□□□ 1.09
DDX55-211ENST00000544429 CABYRO75952 493 aa21.82■■□□□ 1.08
DDX55-211ENST00000544429 MMP3P08254 477 aa21.82■■□□□ 1.08
DDX55-211ENST00000544429 HMGN5P82970 282 aaKnown RBP21.82■■□□□ 1.08
DDX55-211ENST00000544429 MTMR1Q13613 665 aa21.82■■□□□ 1.08
DDX55-211ENST00000544429 CXCL17Q6UXB2 119 aa21.82■■□□□ 1.08
DDX55-211ENST00000544429 SLC43A3Q8NBI5 491 aa21.82■■□□□ 1.08
DDX55-211ENST00000544429 FAM86B1E9PN63 330 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 ZEB2O60315 1214 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 KPNA6O60684 536 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 ATP9AO75110 1047 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 GGPS1O95749 300 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 FAM86B2P0C5J1 330 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 CDK7P50613 346 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 NEDD9Q14511 834 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 METTL7BQ6UX53 244 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
DDX55-211ENST00000544429 TNFRSF25Q93038 417 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 GLT1D1Q96MS3 346 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 STARD7Q9NQZ5 370 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 KCNH7Q9NS40 1196 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 POLR3EQ9NVU0 708 aa21.81■■□□□ 1.08
DDX55-211ENST00000544429 GRIN2DO15399 1336 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 CEP290O15078 2479 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 MMP1P03956 469 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 USP11P51784 963 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 HSDL1Q3SXM5 330 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 OXER1Q8TDS5 423 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 LENG9Q96B70 501 aa21.8■■□□□ 1.08
DDX55-211ENST00000544429 ATN1P54259 1190 aaPredicted RBP21.79■■□□□ 1.08
DDX55-211ENST00000544429 BRDTQ58F21 947 aaPredicted RBP21.79■■□□□ 1.08
DDX55-211ENST00000544429 KRT40Q6A162 431 aa21.79■■□□□ 1.08
DDX55-211ENST00000544429 ANKRD33Q7Z3H0 272 aa21.79■■□□□ 1.08
DDX55-211ENST00000544429 KRT25Q7Z3Z0 450 aa21.79■■□□□ 1.08
DDX55-211ENST00000544429 GIMAP8Q8ND71 665 aaPredicted RBP21.79■■□□□ 1.08
DDX55-211ENST00000544429 TBCKQ8TEA7 893 aa21.79■■□□□ 1.08
DDX55-211ENST00000544429 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 ARP10275 920 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 RTP1P59025 263 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 CUL4AQ13619 759 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 MTG1Q9BT17 334 aaPredicted RBP21.78■■□□□ 1.08
DDX55-211ENST00000544429 AGO4Q9HCK5 861 aaKnown RBP21.78■■□□□ 1.08
DDX55-211ENST00000544429 NFASCO94856 1347 aa21.78■■□□□ 1.08
DDX55-211ENST00000544429 CYP3A7-CYP3A51PA0A087WV96 503 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
DDX55-211ENST00000544429 EVI5O60447 810 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 CYP3A7P24462 503 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 DGKDQ16760 1214 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 TRIM60Q495X7 471 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 MOXD1Q6UVY6 613 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 CYFIP1Q7L576 1253 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 DPF3Q92784 378 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms