RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 EXOC2Q96KP1 924 aa11.19□□□□□ -0.62
MRPS35-204ENST00000542199 IER2Q9BTL4 223 aa11.19□□□□□ -0.62
MRPS35-204ENST00000542199 SLC12A9Q9BXP2 914 aa11.19□□□□□ -0.62
MRPS35-204ENST00000542199 CWC22Q9HCG8 908 aaKnown RBP11.19□□□□□ -0.62
MRPS35-204ENST00000542199 USP6P35125 1406 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
MRPS35-204ENST00000542199 TRAV20A0A0B4J274 112 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 ZNF205O95201 554 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 POU4F1Q01851 419 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 EGR3Q06889 387 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 IKZF1Q13422 519 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 RTP2Q5QGT7 225 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 ZPBP2Q6X784 338 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 NFXL1Q6ZNB6 911 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
MRPS35-204ENST00000542199 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 PRODHO43272 600 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 GCP02774 474 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 L1CAMP32004 1257 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 PCBP3P57721 371 aaKnown RBP11.17□□□□□ -0.62
MRPS35-204ENST00000542199 TEKQ02763 1124 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 PRSS53Q2L4Q9 553 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 FAM209AQ5JX71 171 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 DTX1Q86Y01 620 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 MISP3Q96FF7 219 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 FCRL3Q96P31 734 aaPredicted RBP11.17□□□□□ -0.62
MRPS35-204ENST00000542199 FANCLQ9NW38 375 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 TMEM260Q9NX78 707 aa11.17□□□□□ -0.62
MRPS35-204ENST00000542199 KIAA1324LA8MWY0 1029 aaPredicted RBP11.16□□□□□ -0.62
MRPS35-204ENST00000542199 PRNPP04156 253 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 CD8BP10966 210 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 SCRN1Q12765 414 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 CARS2Q9HA77 564 aaKnown RBP11.16□□□□□ -0.62
MRPS35-204ENST00000542199 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 SLC5A6Q9Y289 635 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 THSD7AQ9UPZ6 1657 aa11.16□□□□□ -0.62
MRPS35-204ENST00000542199 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 TMEM82A0PJX8 343 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 AURKAO14965 403 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 SNRPB2P08579 225 aaKnown RBP11.15□□□□□ -0.62
MRPS35-204ENST00000542199 GSTM1P09488 218 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 PABPC1P11940 636 aaKnown RBP11.15□□□□□ -0.62
MRPS35-204ENST00000542199 GFRA1P56159 465 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 CDC6Q99741 560 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
MRPS35-204ENST00000542199 SSU72P8A0A1W2PR75 194 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 FGFR1P11362 822 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 ECI1P42126 302 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 KCNJ6P48051 423 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 RNF111Q6ZNA4 994 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 TMEM145Q8NBT3 493 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 BACE2Q9Y5Z0 518 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 SLIT3O75094 1523 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
MRPS35-204ENST00000542199 CPSF1Q10570 1443 aaKnown RBP11.13□□□□□ -0.63
MRPS35-204ENST00000542199 ENPP3O14638 875 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 DLX3O60479 287 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 ADAMTS4O75173 837 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 LONRF2Q1L5Z9 754 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 NSMFQ6X4W1 530 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 CDADC1Q9BWV3 514 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 GPRC5CQ9NQ84 441 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 PRDM7Q9NQW5 492 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 CYP26B1Q9NR63 512 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
MRPS35-204ENST00000542199 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
MRPS35-204ENST00000542199 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 TRBV23-1A0A0A0MS06 115 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 CDC45O75419 566 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 RPL10P27635 214 aaKnown RBP11.12□□□□□ -0.63
MRPS35-204ENST00000542199 EVA1CP58658 441 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 FAM177A1Q8N128 213 aaPredicted RBP11.12□□□□□ -0.63
MRPS35-204ENST00000542199 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
MRPS35-204ENST00000542199 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
MRPS35-204ENST00000542199 DISP2A7MBM2 1401 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 BLACEA4D250 179 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 C2orf71A6NGG8 1288 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 THBDP07204 575 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 HOXC12P31275 282 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 ZP2Q05996 745 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 TKFCQ3LXA3 575 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
MRPS35-204ENST00000542199 DENND5AQ6IQ26 1287 aa11.11□□□□□ -0.63
MRPS35-204ENST00000542199 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms