RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 RGS20O76081 388 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 CFBP00751 764 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 MBTPS1Q14703 1052 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 SMC5Q8IY18 1101 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 SAMD3Q8N6K7 520 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 GDPD5Q8WTR4 605 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 WNT8BQ93098 351 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 DSCC1Q9BVC3 393 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 VAT1LQ9HCJ6 419 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
SCARB1-207ENST00000541661 LGR5O75473 907 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 ZNF286BP0CG31 522 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 TGFB3P10600 412 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-207ENST00000541661 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-207ENST00000541661 AAMPQ13685 434 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 HIC1Q14526 733 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 CELF3Q5SZQ8 465 aaKnown RBP15.24■□□□□ 0.03
SCARB1-207ENST00000541661 VSIG10LQ86VR7 867 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 PLEKHM2Q8IWE5 1019 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 PDCD2LQ9BRP1 358 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 KRT23Q9C075 422 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 MICAL3Q7RTP6 2002 aa15.24■□□□□ 0.03
SCARB1-207ENST00000541661 GPR37L1O60883 481 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 IMMTQ16891 758 aaKnown RBP15.23■□□□□ 0.03
SCARB1-207ENST00000541661 HSDL1Q3SXM5 330 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 TMEM31Q5JXX7 168 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
SCARB1-207ENST00000541661 SERINC5Q86VE9 423 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 STAG2Q8N3U4 1231 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 KHSRPQ92945 711 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCARB1-207ENST00000541661 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 CTNNA3Q9UI47 895 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 BRWD1Q9NSI6 2320 aa15.23■□□□□ 0.03
SCARB1-207ENST00000541661 KLRF2D3W0D1 207 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 PI4K2BG5E9Z4 385 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 HIP1O00291 1037 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 ZBTB5O15062 677 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 HOXC8P31273 242 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 SP2Q02086 613 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 PGM5Q15124 567 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 SPATA33Q96N06 139 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 C16orf70Q9BSU1 422 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 UBE2ZQ9H832 354 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-207ENST00000541661 C11orf16Q9NQ32 467 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 DIAPH3Q9NSV4 1193 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 MTUS1Q9ULD2 1270 aa15.22■□□□□ 0.03
SCARB1-207ENST00000541661 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-207ENST00000541661 RSPH10B2B2RC85 870 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 GGPS1O95749 300 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 RSPH10BP0C881 870 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-207ENST00000541661 SEC23AQ15436 765 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 LEXMQ3ZCV2 418 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 PLEKHG4Q58EX7 1191 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 IFIT1BQ5T764 474 aaKnown RBP15.21■□□□□ 0.03
SCARB1-207ENST00000541661 FAM117BQ6P1L5 589 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 DBF4BQ8NFT6 615 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 HCN4Q9Y3Q4 1203 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 PCDHA1Q9Y5I3 950 aa15.21■□□□□ 0.03
SCARB1-207ENST00000541661 AMHP03971 560 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 UBA1P22314 1058 aaKnown RBP15.2■□□□□ 0.02
SCARB1-207ENST00000541661 NUCB1Q02818 461 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 TRAF1Q13077 416 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 IL31RAQ8NI17 732 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-207ENST00000541661 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-207ENST00000541661 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
SCARB1-207ENST00000541661 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 H3BRB1 525 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 CAND2O75155 1236 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 CCND2P30279 289 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-207ENST00000541661 THPOP40225 353 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 MRPL38Q96DV4 380 aaKnown RBP15.19■□□□□ 0.02
SCARB1-207ENST00000541661 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
SCARB1-207ENST00000541661 MLXIPQ9HAP2 919 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
SCARB1-207ENST00000541661 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-207ENST00000541661 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms