RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 HAS3O00219 553 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 EIF3JO75822 258 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 NR3C2P08235 984 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 MYCLP12524 364 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 IL9P15248 144 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 HIC1Q14526 733 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
SMARCA4-206ENST00000538456 ZNF213O14771 459 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 AMHP03971 560 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 THPOP40225 353 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 PTCRAQ6ISU1 281 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 MAF1Q9H063 256 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 JMJD4Q9H9V9 463 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 EMSYQ7Z589 1322 aa16.33■□□□□ 0.2
SMARCA4-206ENST00000538456 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 B4E1Z4 1266 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 OPLAHO14841 1288 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 PARP1P09874 1014 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 HSDL1Q3SXM5 330 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 EP400NLQ6ZTU2 488 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 UIMC1Q96RL1 719 aa16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 ZSCAN10Q96SZ4 725 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-206ENST00000538456 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 RGS20O76081 388 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 GGPS1O95749 300 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 CCDC178Q5BJE1 867 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 ZFP91Q96JP5 570 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 PDCD2LQ9BRP1 358 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
SMARCA4-206ENST00000538456 ATG2AQ2TAZ0 1938 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 PRR33A8MZF0 331 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 UPP2O95045 317 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 CTSHP09668 335 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 HSD17B4P51659 736 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 HTRA4P83105 476 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 PTPROQ16827 1216 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 CELF3Q5SZQ8 465 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 AMNQ9BXJ7 453 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
SMARCA4-206ENST00000538456 WDFY4Q6ZS81 3184 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 GRXCR2A6NFK2 248 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 SDSP20132 328 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 SP2Q02086 613 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 PGM5Q15124 567 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 CSPP1Q1MSJ5 1256 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 PLEKHG4Q58EX7 1191 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 ALYREFQ86V81 257 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 ANKS1AQ92625 1134 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
SMARCA4-206ENST00000538456 BAZ2BQ9UIF8 2168 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 TREHO43280 583 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 PPP1R11O60927 126 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 GPM6BQ13491 265 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 TCEAL5Q5H9L2 206 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 NEK9Q8TD19 979 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 SEPT8Q92599 483 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 UBAC1Q9BSL1 405 aa16.28■□□□□ 0.2
SMARCA4-206ENST00000538456 OSBPL7Q9BZF2 842 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms