RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GPKOWQ92917 476 aaPredicted RBP eCLIP9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CUL5Q93034 780 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 SPATA33Q96N06 139 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 LZTS2Q9BRK4 669 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 ALG1Q9BT22 464 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 PBX4Q9BYU1 374 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CXXC1Q9P0U4 656 aaPredicted RBP9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 SLC12A7Q9Y666 1083 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 DOCK5Q9H7D0 1870 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 hCG_1642624A0A1W2PR95 340 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 GGPS1O95749 300 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 TPM2P07951 284 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 FOSL2P15408 326 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 UBA1P22314 1058 aaKnown RBP9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 SMARCA1P28370 1054 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 PSEN2P49810 448 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 BFSP2Q13515 415 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 MFSD10Q14728 455 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 CELF3Q5SZQ8 465 aaKnown RBP9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 USP17L6PQ6QN14 398 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 SYNE3Q6ZMZ3 975 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 NEK1Q96PY6 1258 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 KATNAL1Q9BW62 490 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 MLXIPQ9HAP2 919 aa9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 TRIP12Q14669 1992 aaPredicted RBP9.84□□□□□ -0.83
SFSWAP-202ENST00000535202 FRMPD4Q14CM0 1322 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 F2P00734 622 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 PFKMP08237 780 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 IQCF3P0C7M6 154 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 RFC2P35250 354 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 MRPS9P82933 396 aaKnown RBP9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 SP2Q02086 613 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 KIAA0753Q2KHM9 967 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 HSDL1Q3SXM5 330 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 GNPTABQ3T906 1256 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 TMTC3Q6ZXV5 915 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 SESTD1Q86VW0 696 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 SGMS1Q86VZ5 419 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 CCDC155Q8N6L0 562 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 C7orf31Q8N865 590 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 FANCBQ8NB91 859 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 MAFAQ8NHW3 353 aaPredicted RBP9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 VWCEQ96DN2 955 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 FTOQ9C0B1 505 aaKnown RBP eCLIP9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 RTEL1Q9NZ71 1219 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 HDAC6Q9UBN7 1215 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 MSRAQ9UJ68 235 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 SLC4A7Q9Y6M7 1214 aa9.83□□□□□ -0.84
SFSWAP-202ENST00000535202 PIK3CDO00329 1044 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 MEIS2O14770 477 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 STAM2O75886 525 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 TGFB3P10600 412 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 ACTN1P12814 892 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 RABGGTBP53611 331 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 KRT32Q14532 448 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 RAB30Q15771 203 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 RTN1Q16799 776 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 ADCK5Q3MIX3 580 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 HEATR3Q7Z4Q2 680 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 CTAGE1Q96RT6 745 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 PDCL3Q9H2J4 239 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 NKX2-4Q9H2Z4 354 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 PSTPIP2Q9H939 334 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 GTF2IRD1Q9UHL9 959 aa9.82□□□□□ -0.84
SFSWAP-202ENST00000535202 HAS3O00219 553 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 NOP56O00567 594 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 ZBTB43O43298 467 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 FIBPO43427 364 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 PPFIA4O75335 1185 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 HOXD8P13378 290 aaPredicted RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 ATP2A2P16615 1042 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 ICAM3P32942 547 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 ZNF200P98182 395 aaPredicted RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 EXOSC10Q01780 885 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 SP4Q02446 784 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 SEMA3FQ13275 785 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 NEDD9Q14511 834 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 UBE2SQ16763 222 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 PCNX4Q63HM2 1172 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 APOA5Q6Q788 366 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 LRRC8DQ7L1W4 858 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 CYFIP1Q7L576 1253 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 NLRX1Q86UT6 975 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 DHX38Q92620 1227 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 INPP4AQ96PE3 977 aaPredicted RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 BCAS3Q9H6U6 928 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms