RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 SORBS3O60504 671 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 MED24O75448 989 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 SPA17Q15506 151 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 UNC13DQ70J99 1090 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 SBF2Q86WG5 1849 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 ZBTB39O15060 712 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 TADA3O75528 432 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 KCNJ6P48051 423 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 IKZF4Q9H2S9 585 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 NDST4Q9H3R1 872 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 CLIC2O15247 247 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 CUEDC2Q9H467 287 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 NHEJ1Q9H9Q4 299 aaPredicted RBP17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 MRFAP1Q9Y605 127 aa17.68■□□□□ 0.42
ATP2C1-224ENST00000533801 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 DNAAF5Q86Y56 855 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 SNHG28P0DPA3 235 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 GOLGA1Q92805 767 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 ZNF446Q9NWS9 450 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 FZD1Q9UP38 647 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 CXCR5P32302 372 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 PARD6BQ9BYG5 372 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 SAMM50Q9Y512 469 aa17.67■□□□□ 0.42
ATP2C1-224ENST00000533801 ADAMTSL1Q8N6G6 1762 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 FAM86B1E9PN63 330 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 FAM86B2P0C5J1 330 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 OGFRQ9NZT2 677 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 BUB1O43683 1085 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 PRKG1Q13976 671 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 SLC15A2Q16348 729 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 CCDC65Q8IXS2 484 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 RDH13Q8NBN7 331 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 STK17AQ9UEE5 414 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 PRR12Q9ULL5 1215 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 CYLC1P35663 651 aaPredicted RBP17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 FXR2P51116 673 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 SP4Q02446 784 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 RAPGEF1Q13905 1077 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 KRT222Q8N1A0 295 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 GJA3Q9Y6H8 435 aa17.66■□□□□ 0.42
ATP2C1-224ENST00000533801 TRIM14Q14142 442 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 NEK11Q8NG66 645 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 SUGCTQ9HAC7 445 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 EFCAB8A8MWE9 144 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 PLSCR1O15162 318 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 GCNT3O95395 438 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 STAT2P52630 851 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 POLR2FP61218 127 aaKnown RBP17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 VWA3BQ502W6 1294 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 KIAA1755Q5JYT7 1200 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 CCDC51Q96ER9 411 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 PCDHB13Q9Y5F0 798 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 LRRC10BA6NIK2 292 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 MEIS2O14770 477 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 LSM14BQ9BX40 385 aaKnown RBP17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 MLXIPQ9HAP2 919 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 DDX41Q9UJV9 622 aaKnown RBP17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 DNM3Q9UQ16 869 aa17.65■□□□□ 0.42
ATP2C1-224ENST00000533801 LRRC53A6NM62 1247 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 ZNF185O15231 689 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 CLSTN1O94985 981 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 ADAM9Q13443 819 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 NBPF9Q3BBW0 867 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 WDR59Q6PJI9 974 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 CATSPER3Q86XQ3 398 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 ZCCHC17Q9NP64 241 aaKnown RBP17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 HDAC9Q9UKV0 1011 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 REXO2Q9Y3B8 237 aaKnown RBP17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 CTAGE15A4D2H0 777 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 RCCD1A6NED2 376 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 PHACTR2O75167 634 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 CTAGE8P0CG41 777 aa17.64■□□□□ 0.41
ATP2C1-224ENST00000533801 DPEP1P16444 411 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms