RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 DDX20Q9UHI6 824 aaKnown RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 TRIOBPQ9H2D6 2365 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 LCTP09848 1927 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 FUT2Q10981 343 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ZNF792Q3KQV3 632 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 RETREG2Q8NC44 543 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 GTF3C6Q969F1 213 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 COL6A1P12109 1028 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 SCG2P13521 617 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 SH2B1Q9NRF2 756 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 DIS3Q9Y2L1 958 aaKnown RBP12.64□□□□□ -0.39
CCDC84-205ENST00000528088 NR2E3Q9Y5X4 410 aa12.64□□□□□ -0.39
CCDC84-205ENST00000528088 DNAJC25-GNG10A0A024R161 153 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 B4DLN1 442 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 hCG_1984214I3L0E3 225 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 DTNBO60941 627 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 DEXIO95424 95 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 MCM2P49736 904 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
CCDC84-205ENST00000528088 NTRK3Q16288 839 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
CCDC84-205ENST00000528088 ARHGEF16Q5VV41 709 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
CCDC84-205ENST00000528088 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 TBC1D5Q92609 795 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
CCDC84-205ENST00000528088 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
CCDC84-205ENST00000528088 ZHX1Q9UKY1 873 aaPredicted RBP12.63□□□□□ -0.39
CCDC84-205ENST00000528088 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 ASB14A6NK59 587 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 STXBP3O00186 592 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 SYN1P17600 705 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 ADCY7P51828 1080 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 LRRC26Q2I0M4 334 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 PPP1R18Q6NYC8 613 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 ARMCX2Q7L311 632 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 SYTL5Q8TDW5 730 aaPredicted RBP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 TSC1Q92574 1164 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 RMDN3Q96TC7 470 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
CCDC84-205ENST00000528088 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 RANBP2P49792 3224 aaKnown RBP12.62□□□□□ -0.39
CCDC84-205ENST00000528088 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 CFHP08603 1231 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 XBP1P17861 261 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 EIF2AK2P19525 551 aaKnown RBP12.61□□□□□ -0.39
CCDC84-205ENST00000528088 NLRP5P59047 1200 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 UBE2SQ16763 222 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
CCDC84-205ENST00000528088 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 EEPD1Q7L9B9 569 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 NSUN6Q8TEA1 469 aaKnown RBP12.61□□□□□ -0.39
CCDC84-205ENST00000528088 WASF1Q92558 559 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 TAAR1Q96RJ0 339 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
CCDC84-205ENST00000528088 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
CCDC84-205ENST00000528088 VPS54Q9P1Q0 977 aa12.61□□□□□ -0.39
CCDC84-205ENST00000528088 OPLAHO14841 1288 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 SEPT4O43236 478 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
CCDC84-205ENST00000528088 HSD17B4P51659 736 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 TRIM29Q14134 588 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 PKN1Q16512 942 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
CCDC84-205ENST00000528088 SAMD3Q8N6K7 520 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 FAM184AQ8NB25 1140 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 EPS8L1Q8TE68 723 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
CCDC84-205ENST00000528088 LENG1Q96BZ8 264 aaPredicted RBP12.6□□□□□ -0.39
CCDC84-205ENST00000528088 FGD4Q96M96 766 aa12.6□□□□□ -0.39
CCDC84-205ENST00000528088 MAF1Q9H063 256 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms