RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ZDBF2Q9HCK1 2354 aa19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 ZNF543Q08ER8 600 aa19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 MFSD10Q14728 455 aa19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 RNF135Q8IUD6 432 aa19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 IWS1Q96ST2 819 aa19.12■□□□□ 0.65
CHMP4A-203ENST00000527154 RALGAPA2Q2PPJ7 1873 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 FRMPD2Q68DX3 1309 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 ZNF200P98182 395 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 DLX2Q07687 328 aaPredicted RBP19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 KIAA0753Q2KHM9 967 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 IER5LQ5T953 404 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 LMAN2LQ9H0V9 348 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 CLDND1Q9NY35 253 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 COL20A1Q9P218 1284 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 KIAA1217Q5T5P2 1943 aa19.11■□□□□ 0.65
CHMP4A-203ENST00000527154 CHMP4BP1P59074 171 aa19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 CTDSPL2Q05D32 466 aa19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 HYAL1Q12794 435 aa19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 SMAD4Q13485 552 aaKnown RBP19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 TSHZ3Q63HK5 1081 aa19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 SYTL5Q8TDW5 730 aaPredicted RBP19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 RC3H2Q9HBD1 1191 aaKnown RBP19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 GPCPD1Q9NPB8 672 aa19.1■□□□□ 0.65
CHMP4A-203ENST00000527154 RSPH10B2B2RC85 870 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 CAND2O75155 1236 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 EYA4O95677 639 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 RB1P06400 928 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 RSPH10BP0C881 870 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 FOXK2Q01167 660 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 LAMC2Q13753 1193 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 TRIM67Q6ZTA4 783 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 SEPT14Q6ZU15 432 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 NSUN6Q8TEA1 469 aaKnown RBP19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 TBC1D5Q92609 795 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 TAAR1Q96RJ0 339 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 YME1L1Q96TA2 773 aa19.09■□□□□ 0.65
CHMP4A-203ENST00000527154 NLRC5Q86WI3 1866 aa19.08■□□□□ 0.65
CHMP4A-203ENST00000527154 TBX10O75333 385 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 PPFIA4O75335 1185 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 GHRHRQ02643 423 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 CBX2Q14781 532 aaPredicted RBP19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 ALX1Q15699 326 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 STXBP2Q15833 593 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 PI4K2BQ8TCG2 481 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 GPATCH3Q96I76 525 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 MSLNLQ96KJ4 702 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 ALG1Q9BT22 464 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 OSBPL7Q9BZF2 842 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 CHMP4BQ9H444 224 aaKnown RBP19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 MTMR7Q9Y216 660 aa19.08■□□□□ 0.64
CHMP4A-203ENST00000527154 DMDP11532 3685 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 RANBP6O60518 1105 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 ZNF286BP0CG31 522 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 CLP1Q92989 425 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 TTC14Q96N46 770 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 C16orf70Q9BSU1 422 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 KMT2EQ8IZD2 1858 aa19.07■□□□□ 0.64
CHMP4A-203ENST00000527154 TTC41PQ6P2S7 1318 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 DCHS1Q96JQ0 3298 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 TMEM221A6NGB7 291 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 M0R296 226 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 EIF3JO75822 258 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 RGS20O76081 388 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 BMPR1AP36894 532 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 MYSM1Q5VVJ2 828 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 CHST3Q7LGC8 479 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 SEPT8Q92599 483 aa19.06■□□□□ 0.64
CHMP4A-203ENST00000527154 ZFHX2Q9C0A1 2572 aaPredicted RBP19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 LOC730098B7Z3J9 87 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 THPOP40225 353 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 ADAM15Q13444 863 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 CAMK1Q14012 370 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 HSDL1Q3SXM5 330 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 GPATCH4Q5T3I0 446 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 RMDN3Q96TC7 470 aa19.05■□□□□ 0.64
CHMP4A-203ENST00000527154 ABCB11O95342 1321 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 GRM6O15303 877 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 ZXDAP98168 799 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 VPS53Q5VIR6 699 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 FBXL6Q8N531 539 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 APBB2Q92870 758 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 PBXIP1Q96AQ6 731 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 C11orf84Q9BUA3 381 aaPredicted RBP19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 CD207Q9UJ71 328 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 RWDD3Q9Y3V2 267 aa19.04■□□□□ 0.64
CHMP4A-203ENST00000527154 ZMYM6O95789 1325 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 STXBP3O00186 592 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 MMP1P03956 469 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 NR3C2P08235 984 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 ADAM17P78536 824 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 USH1GQ495M9 461 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 FAM26DQ5JW98 314 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 CELF3Q5SZQ8 465 aaKnown RBP19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 EP400NLQ6ZTU2 488 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 SMRP1Q8NCR6 262 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 IL17RAQ96F46 866 aa19.03■□□□□ 0.64
CHMP4A-203ENST00000527154 IFIH1Q9BYX4 1025 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms