RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 TTLL6Q8N841 843 aa6.86□□□□□ -1.31
CTHRC1-204ENST00000520880 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
CTHRC1-204ENST00000520880 HNRNPLLQ8WVV9 542 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-204ENST00000520880 CLDND1Q9NY35 253 aa6.86□□□□□ -1.31
CTHRC1-204ENST00000520880 NPFFR2Q9Y5X5 522 aa6.86□□□□□ -1.31
CTHRC1-204ENST00000520880 HGSO14964 777 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 ADAM9Q13443 819 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 MCTP2Q6DN12 878 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 HHIPL2Q6UWX4 724 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 YIPF4Q9BSR8 244 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 EPN3Q9H201 632 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 ST7Q9NRC1 585 aa6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 CNOT11Q9UKZ1 510 aaKnown RBP6.85□□□□□ -1.31
CTHRC1-204ENST00000520880 A0A1W2PQU0 124 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 TCRBV5S2A0A599 114 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 TADA3O75528 432 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 ITGB3P05106 788 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 DNAJA1P31689 397 aaKnown RBP6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 NKX3-2P78367 333 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 EMC4Q5J8M3 183 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 STEAP3Q658P3 488 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 RBM15Q96T37 977 aaKnown RBP eCLIP6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 NGRNQ9NPE2 291 aaKnown RBP6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
CTHRC1-204ENST00000520880 DDX3XO00571 662 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 MAP4K2Q12851 820 aa6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 CHRNA2Q15822 529 aa6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 FAM26FQ5R3K3 315 aa6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 TXNDC5Q8NBS9 432 aaKnown RBP6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 DTLQ9NZJ0 730 aa6.83□□□□□ -1.32
CTHRC1-204ENST00000520880 MROH6A6NGR9 719 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 AGRPO00253 132 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 DLX3O60479 287 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 DGKIO75912 1065 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 DDR2Q16832 855 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 TEPPQ6URK8 271 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 ANKS3Q6ZW76 656 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 KCTD13Q8WZ19 329 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 TOE1Q96GM8 510 aaKnown RBP6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 ZSWIM3Q96MP5 696 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 EPB41L1Q9H4G0 881 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
CTHRC1-204ENST00000520880 MSCO60682 206 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 LRG1P02750 347 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 ZNF28P17035 718 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 MYOTQ9UBF9 498 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 PPARGC1AQ9UBK2 798 aaKnown RBP6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 R3HCC1Q9Y3T6 440 aaKnown RBP6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
CTHRC1-204ENST00000520880 KLF4O43474 513 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 PLATP00750 562 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 MAGEA10P43363 369 aaPredicted RBP6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 ZNF827Q17R98 1081 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 USP53Q70EK8 1073 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 LGI4Q8N135 537 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 GMLQ99445 158 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 JAM3Q9BX67 310 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 GPR27Q9NS67 375 aa6.8□□□□□ -1.32
CTHRC1-204ENST00000520880 MLLT6P55198 1093 aaPredicted RBP6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 ZXDCQ2QGD7 858 aaPredicted RBP6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 PRAMEF18Q5VWM3 479 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 FAM124AQ86V42 546 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 SLC43A3Q8NBI5 491 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 BORCS6Q96GS4 357 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 LCORQ96JN0 433 aaPredicted RBP6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 PHF20Q9BVI0 1012 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 SMPD4Q9NXE4 827 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
CTHRC1-204ENST00000520880 B4GALT3O60512 393 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 INSRRP14616 1297 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 ADAM17P78536 824 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 HSP90AA2PQ14568 343 aaPredicted RBP6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 PIP4K2CQ8TBX8 421 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 PHOSPHO1Q8TCT1 267 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 SGSM3Q96HU1 749 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 SLC6A20Q9NP91 592 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 ASH2LQ9UBL3 628 aa6.78□□□□□ -1.32
CTHRC1-204ENST00000520880 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 SLC27A2O14975 620 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 IL13P35225 146 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 KCNT2Q6UVM3 1135 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 RSPO2Q6UXX9 243 aaPredicted RBP6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 ZCCHC14Q8WYQ9 949 aaKnown RBP6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 YTHDC1Q96MU7 727 aaKnown RBP6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 CLIC6Q96NY7 704 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 AARSD1Q9BTE6 412 aaKnown RBP6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 CROTQ9UKG9 612 aa6.77□□□□□ -1.33
CTHRC1-204ENST00000520880 KRIT1O00522 736 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms