RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 KHSRPQ92945 711 aaKnown RBP eCLIP19.6■□□□□ 0.735e-6■□□□□ 9.7
TNPO1-211ENST00000518279 EMID1Q96A84 441 aaPredicted RBP19.6■□□□□ 0.73
TNPO1-211ENST00000518279 ZBED2Q9BTP6 218 aa19.6■□□□□ 0.73
TNPO1-211ENST00000518279 CNNM2Q9H8M5 875 aa19.6■□□□□ 0.73
TNPO1-211ENST00000518279 MTUS1Q9ULD2 1270 aa19.6■□□□□ 0.73
TNPO1-211ENST00000518279 MYH7BA7E2Y1 1941 aa19.6■□□□□ 0.73
TNPO1-211ENST00000518279 HAS3O00219 553 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 EIF3JO75822 258 aaKnown RBP19.59■□□□□ 0.73
TNPO1-211ENST00000518279 RGS20O76081 388 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 GJB5O95377 273 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 NR3C2P08235 984 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 HIC1Q14526 733 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 MFSD10Q14728 455 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 ASPRV1Q53RT3 343 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 PXMP2Q9NR77 195 aa19.59■□□□□ 0.73
TNPO1-211ENST00000518279 MRPL11Q9Y3B7 192 aaKnown RBP19.59■□□□□ 0.73
TNPO1-211ENST00000518279 LINC01553A4QN01 128 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 F2P00734 622 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 CFBP00751 764 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 CYP21A2P08686 494 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 PTK7Q13308 1070 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 KIAA0753Q2KHM9 967 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 ZNF618Q5T7W0 954 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 STAG2Q8N3U4 1231 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 PPTC7Q8NI37 304 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 RAD9AQ99638 391 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 LRFN3Q9BTN0 628 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 SUGCTQ9HAC7 445 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 MRVI1Q9Y6F6 885 aa19.58■□□□□ 0.72
TNPO1-211ENST00000518279 ABHD14A-ACY1A0A1B0GW23 586 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
TNPO1-211ENST00000518279 SORBS3O60504 671 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 PPP1R11O60927 126 aaPredicted RBP19.57■□□□□ 0.72
TNPO1-211ENST00000518279 PARNO95453 639 aaKnown RBP19.57■□□□□ 0.72
TNPO1-211ENST00000518279 PARP1P09874 1014 aaKnown RBP19.57■□□□□ 0.72
TNPO1-211ENST00000518279 HSD17B4P51659 736 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 SEC23AQ15436 765 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 FAM117BQ6P1L5 589 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 CYB5R4Q7L1T6 521 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 DHX37Q8IY37 1157 aaKnown RBP19.57■□□□□ 0.72
TNPO1-211ENST00000518279 FAM122AQ96E09 287 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 KATNAL1Q9BW62 490 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 LMCD1Q9NZU5 365 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 TAF6LQ9Y6J9 622 aa19.57■□□□□ 0.72
TNPO1-211ENST00000518279 HOXD8P13378 290 aaPredicted RBP19.56■□□□□ 0.72
TNPO1-211ENST00000518279 ERVK-21P61565 698 aa19.56■□□□□ 0.72
TNPO1-211ENST00000518279 TGS1Q96RS0 853 aaKnown RBP19.56■□□□□ 0.72
TNPO1-211ENST00000518279 UBAC1Q9BSL1 405 aa19.56■□□□□ 0.72
TNPO1-211ENST00000518279 CD320Q9NPF0 282 aa19.56■□□□□ 0.72
TNPO1-211ENST00000518279 U3KPZ7 1027 aaPredicted RBP19.56■□□□□ 0.72
TNPO1-211ENST00000518279 SIP14410 1827 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 SP2Q02086 613 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 GHRHRQ02643 423 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 IKBKEQ14164 716 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 HSDL1Q3SXM5 330 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.55■□□□□ 0.722e-16■■■■■ 40.1
TNPO1-211ENST00000518279 MAP4K1Q92918 833 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 PDCD2LQ9BRP1 358 aa19.55■□□□□ 0.72
TNPO1-211ENST00000518279 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
TNPO1-211ENST00000518279 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
TNPO1-211ENST00000518279 IFIT1BQ5T764 474 aaKnown RBP19.54■□□□□ 0.72
TNPO1-211ENST00000518279 IL31RAQ8NI17 732 aa19.54■□□□□ 0.72
TNPO1-211ENST00000518279 GPKOWQ92917 476 aaPredicted RBP eCLIP19.54■□□□□ 0.722e-7■□□□□ 10.9
TNPO1-211ENST00000518279 ZFP91Q96JP5 570 aaPredicted RBP19.54■□□□□ 0.72
TNPO1-211ENST00000518279 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
TNPO1-211ENST00000518279 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
TNPO1-211ENST00000518279 E7EWF7 191 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 PPFIA4O75335 1185 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 LGR5O75473 907 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 GGPS1O95749 300 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 HOXA13P31271 388 aaPredicted RBP19.53■□□□□ 0.72
TNPO1-211ENST00000518279 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 CELF3Q5SZQ8 465 aaKnown RBP19.53■□□□□ 0.72
TNPO1-211ENST00000518279 STOX1Q6ZVD7 989 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 SKAP1Q86WV1 359 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 MTMR8Q96EF0 704 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 C17orf80Q9BSJ5 609 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 C16orf70Q9BSU1 422 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 BCAS3Q9H6U6 928 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 UBE2ZQ9H832 354 aaPredicted RBP19.53■□□□□ 0.72
TNPO1-211ENST00000518279 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
TNPO1-211ENST00000518279 C5orf42Q9H799 3197 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 TRIOO75962 3097 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.52■□□□□ 0.72
TNPO1-211ENST00000518279 KLRF2D3W0D1 207 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 EFCAB14O75071 495 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 TRDNQ13061 729 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 PGM5Q15124 567 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 TMEM31Q5JXX7 168 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 CENPQQ7L2Z9 268 aaPredicted RBP19.52■□□□□ 0.72
TNPO1-211ENST00000518279 SERINC5Q86VE9 423 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 DBF4BQ8NFT6 615 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 PCDHA1Q9Y5I3 950 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 MICAL3Q7RTP6 2002 aa19.52■□□□□ 0.72
TNPO1-211ENST00000518279 FAM86C2PA6NEL3 165 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms