RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ZNF274Q96GC6 653 aaPredicted RBP24.46■■□□□ 1.51
UBE2D3-229ENST00000510129 RNF26Q9BY78 433 aaPredicted RBP24.46■■□□□ 1.51
UBE2D3-229ENST00000510129 MLXIPQ9HAP2 919 aa24.46■■□□□ 1.51
UBE2D3-229ENST00000510129 PDRG1Q9NUG6 133 aa24.46■■□□□ 1.51
UBE2D3-229ENST00000510129 SPATA31C2B4DYI2 1134 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 STXBP3O00186 592 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 GGPS1O95749 300 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 UBA1P22314 1058 aaKnown RBP24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 PDIA3P30101 505 aaKnown RBP24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 AP3B2Q13367 1082 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 MFSD5Q6N075 450 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 CPLX2Q6PUV4 134 aaKnown RBP24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 GPRASP2Q96D09 838 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 SENP7Q9BQF6 1050 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 PCDHA6Q9UN73 950 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 PCDHA8Q9Y5H6 950 aa24.45■■□□□ 1.5
UBE2D3-229ENST00000510129 SCN10AQ9Y5Y9 1956 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 ESYT2A0FGR8 921 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 SMCO2A6NFE2 343 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 MAFGO15525 162 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 HOXD8P13378 290 aaPredicted RBP24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 IFNAR1P17181 557 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 PPIGQ13427 754 aaKnown RBP eCLIP24.44■■□□□ 1.52e-7■□□□□ 10.5
UBE2D3-229ENST00000510129 TOB2Q14106 344 aaPredicted RBP24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 NBPF20Q3BBV1 942 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 GPR153Q6NV75 609 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 TRIM22Q8IYM9 498 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 SPATA33Q96N06 139 aa24.44■■□□□ 1.5
UBE2D3-229ENST00000510129 B4GALT4O60513 344 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 ANKRD1Q15327 319 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 FAM47CQ5HY64 1035 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 METTL7BQ6UX53 244 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 SESTD1Q86VW0 696 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 UPF3BQ9BZI7 483 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 HIPK3Q9H422 1215 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 C6orf50Q9HD87 102 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 RTEL1Q9NZ71 1219 aa24.43■■□□□ 1.5
UBE2D3-229ENST00000510129 TRIOBPQ9H2D6 2365 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 NOP56O00567 594 aaKnown RBP24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 CPLX1O14810 134 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 GNA11P29992 359 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 UBE2SQ16763 222 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 CCDC148Q8NFR7 591 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 TRPV6Q9H1D0 765 aa24.42■■□□□ 1.5
UBE2D3-229ENST00000510129 F2P00734 622 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 ITGB8P26012 769 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 SP2Q02086 613 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 FAM177A1Q8N128 213 aaPredicted RBP24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 BICD2Q8TD16 824 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 IL17RAQ96F46 866 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 NOD1Q9Y239 953 aa24.41■■□□□ 1.5
UBE2D3-229ENST00000510129 MTMR1Q13613 665 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 NTRK3Q16288 839 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 TYW1BQ6NUM6 668 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 CCDC155Q8N6L0 562 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 ZMYND12Q9H0C1 365 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 SH3GLB2Q9NR46 395 aa24.4■■□□□ 1.5
UBE2D3-229ENST00000510129 MYH7BA7E2Y1 1941 aa24.39■■□□□ 1.5
UBE2D3-229ENST00000510129 CDKL5O76039 1030 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 CCT2P78371 535 aaKnown RBP24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 HSDL1Q3SXM5 330 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 C7orf31Q8N865 590 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 NOC4LQ9BVI4 516 aaKnown RBP24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 SLC26A6Q9BXS9 759 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 UBIAD1Q9Y5Z9 338 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 DNAH12Q6ZR08 3092 aa24.39■■□□□ 1.49
UBE2D3-229ENST00000510129 CLK2P49760 499 aaKnown RBP24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 PSEN2P49810 448 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 SSRP1Q08945 709 aaKnown RBP24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 BFSP2Q13515 415 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 MFSD10Q14728 455 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 PSRC1Q6PGN9 363 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 KAT2BQ92831 832 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 PHKBQ93100 1093 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 ZFP91Q96JP5 570 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 ANO3Q9BYT9 981 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 PPP1R12CQ9BZL4 782 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 JADE2Q9NQC1 790 aa24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 TRMT13Q9NUP7 481 aaKnown RBP24.38■■□□□ 1.49
UBE2D3-229ENST00000510129 HAS3O00219 553 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 PITPNM1O00562 1244 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 ITGB5P18084 799 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 CHMP4BP1P59074 171 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 SHHQ15465 462 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 PKN1Q16512 942 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 CYFIP1Q7L576 1253 aa24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 RPUSD2Q8IZ73 545 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 REXO1Q8N1G1 1221 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 MTIF3Q9H2K0 278 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 NCOA5Q9HCD5 579 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-229ENST00000510129 DEXIO95424 95 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 PFKMP08237 780 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 CYP2C18P33260 490 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 SREBF1P36956 1147 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 SEMA3FQ13275 785 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 PTGISQ16647 500 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 KIAA0753Q2KHM9 967 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 RETREG2Q8NC44 543 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 GTF2IRD1Q9UHL9 959 aa24.36■■□□□ 1.49
UBE2D3-229ENST00000510129 ZNF215Q9UL58 517 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms