RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 VWA3BQ502W6 1294 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
SCLT1-208ENST00000506368 RASSF8Q8NHQ8 419 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 LPIN2Q92539 896 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 CUL5Q93034 780 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 BCCIPQ9P287 314 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCLT1-208ENST00000506368 TMEM59LQ9UK28 342 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.49■□□□□ 0.39
SCLT1-208ENST00000506368 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 V9GY48 417 aaPredicted RBP17.49■□□□□ 0.39
SCLT1-208ENST00000506368 ORC4O43929 436 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 A1BGP04217 495 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 AMPD3Q01432 767 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 ITIH4Q14624 930 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 IL17AQ16552 155 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 MAN2A1Q16706 1144 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 DTHD1Q6ZMT9 781 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 AK8Q96MA6 479 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 ZKSCAN3Q9BRR0 538 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 HOMER3Q9NSC5 361 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 SIK3Q9Y2K2 1263 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 PCDHGC5Q9Y5F6 944 aa17.49■□□□□ 0.39
SCLT1-208ENST00000506368 H0YGN5 161 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 WNT7AO00755 349 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ATP6V1G2O95670 118 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 PDHBP11177 359 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 PRPHP41219 470 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 GRIK3Q13003 919 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 NAALADL2Q58DX5 795 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 CNNM4Q6P4Q7 775 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 CACNA2D4Q7Z3S7 1137 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ARMC2Q8NEN0 867 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 HVCN1Q96D96 273 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 SH3GLB2Q9NR46 395 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 NFS1Q9Y697 457 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 SLC4A4Q9Y6R1 1079 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 BHMG1C9JSJ3 638 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 LIN7AO14910 233 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 CXCR5P32302 372 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 MCM7P33993 719 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 HSD17B3P37058 310 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 UBA7P41226 1012 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 LMNB2Q03252 620 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 PUM3Q15397 648 aaKnown RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 FAM212AQ96EL1 285 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 PBKQ96KB5 322 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 INPP4AQ96PE3 977 aaPredicted RBP17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
SCLT1-208ENST00000506368 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 SRCAPQ6ZRS2 3230 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 BTNL10A8MVZ5 291 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 HPDP32754 393 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-208ENST00000506368 CTNNA1P35221 906 aaKnown RBP17.47■□□□□ 0.39
SCLT1-208ENST00000506368 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
SCLT1-208ENST00000506368 GUCY2FP51841 1108 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 NLRP5P59047 1200 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 ELF3P78545 371 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-208ENST00000506368 NAB2Q15742 525 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 SLC9C1Q4G0N8 1177 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 IFIT1BQ5T764 474 aaKnown RBP17.47■□□□□ 0.39
SCLT1-208ENST00000506368 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 USP38Q8NB14 1042 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 ANKRD27Q96NW4 1050 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 KRT12Q99456 494 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 HINFPQ9BQA5 517 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
SCLT1-208ENST00000506368 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 CCDC188H7C350 402 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 SCG2P13521 617 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 IFI16Q16666 785 aaKnown RBP17.46■□□□□ 0.39
SCLT1-208ENST00000506368 CPLX4Q7Z7G2 160 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 CROCCP2Q86T23 111 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 C7orf25Q9BPX7 421 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 LRP5O75197 1615 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 MYH10P35580 1976 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ASAP2O43150 1006 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 PLEKP08567 350 aaPredicted RBP17.46■□□□□ 0.39
SCLT1-208ENST00000506368 PAX7P23759 505 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 KLK7P49862 253 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 NT5C2P49902 561 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ZNF844Q08AG5 666 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms