RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP11P51784 963 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 ZBED6P86452 979 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 NAPGQ99747 312 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-206ENST00000495554 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-206ENST00000495554 COL2A1P02458 1487 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 A0A1W2PQJ5 194 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 TCP10L2B9ZVM9 353 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 NDUFB10O96000 172 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 ABL1P00519 1130 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 IDEP14735 1019 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 TUBB4BP68371 445 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 KRT83P78385 493 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 EHHADHQ08426 723 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 FOXR2Q6PJQ5 311 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 KCNK18Q7Z418 384 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 AGPAT5Q9NUQ2 364 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 REXO2Q9Y3B8 237 aaKnown RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 ABCB11O95342 1321 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 KDM3AQ9Y4C1 1321 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.222e-14■■■□□ 18.7
CHTOP-206ENST00000495554 HYIQ5T013 277 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
CHTOP-206ENST00000495554 PCMTD1Q96MG8 357 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-206ENST00000495554 SNAP25P60880 206 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
CHTOP-206ENST00000495554 FHOD1Q9Y613 1164 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 MEIS2O14770 477 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 SLC26A4O43511 780 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 CYLC1P35663 651 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-206ENST00000495554 ECM1Q16610 540 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 ZNF662Q6ZS27 426 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 CCDC170Q8IYT3 715 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 GJA10Q969M2 543 aa16.43■□□□□ 0.22
CHTOP-206ENST00000495554 BMP2KQ9NSY1 1161 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-206ENST00000495554 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 CYP3A7P24462 503 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 CDK17Q00537 523 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 AP3B2Q13367 1082 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 NDST4Q9H3R1 872 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 ATP8B1O43520 1251 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
CHTOP-206ENST00000495554 KLK7P49862 253 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 TAF3Q5VWG9 929 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 MOXD1Q6UVY6 613 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
CHTOP-206ENST00000495554 FAM151AQ8WW52 585 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 DNAJC19Q96DA6 116 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 TSG101Q99816 390 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHTOP-206ENST00000495554 KCNMB3Q9NPA1 279 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
CHTOP-206ENST00000495554 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
CHTOP-206ENST00000495554 IPO7O95373 1038 aaKnown RBP16.41■□□□□ 0.22
CHTOP-206ENST00000495554 BAG6P46379 1132 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
CHTOP-206ENST00000495554 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 MAN2A1Q16706 1144 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 PARD6BQ9BYG5 372 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 ECE1P42892 770 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 HERVK_113P62684 666 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 SLFN12Q8IYM2 578 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 EHBP1Q8NDI1 1231 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 MBOAT7Q96N66 472 aa16.41■□□□□ 0.22
CHTOP-206ENST00000495554 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
CHTOP-206ENST00000495554 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
CHTOP-206ENST00000495554 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
CHTOP-206ENST00000495554 BMP3P12645 472 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms