RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 DDAH1O94760 285 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 LIFRP42702 1097 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 PSEN2P49810 448 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 RABGGTBP53611 331 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.64
MSH5-218ENST00000494646 PTPN11Q06124 597 aaPredicted RBP11.08□□□□□ -0.64
MSH5-218ENST00000494646 HSDL1Q3SXM5 330 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 CELF3Q5SZQ8 465 aaKnown RBP11.08□□□□□ -0.64
MSH5-218ENST00000494646 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 TIFAQ96CG3 184 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 LZTS2Q9BRK4 669 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 MTA3Q9BTC8 594 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 ZNF576Q9H609 170 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 MLXIPQ9HAP2 919 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
MSH5-218ENST00000494646 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
MSH5-218ENST00000494646 DLL1O00548 723 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 MEIS2O14770 477 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 ZNF286BP0CG31 522 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 SMARCA1P28370 1054 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 GNAQP50148 359 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
MSH5-218ENST00000494646 NBR1Q14596 966 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 ADCK5Q3MIX3 580 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 C7orf31Q8N865 590 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 FANCBQ8NB91 859 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 CUL5Q93034 780 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
MSH5-218ENST00000494646 SPATA33Q96N06 139 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSH5-218ENST00000494646 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 SLC4A7Q9Y6M7 1214 aa11.07□□□□□ -0.64
MSH5-218ENST00000494646 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CDC45O75419 566 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CALM1P0DP23 149 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CALM2P0DP24 149 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CALM3P0DP25 149 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 TGFB3P10600 412 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CPA1P15085 419 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 MYOGP15173 224 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 FOSL2P15408 326 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 UBA1P22314 1058 aaKnown RBP11.06□□□□□ -0.64
MSH5-218ENST00000494646 EXOSC10Q01780 885 aaKnown RBP11.06□□□□□ -0.64
MSH5-218ENST00000494646 BFSP2Q13515 415 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 MFSD10Q14728 455 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CYFIP1Q7L576 1253 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 MICU3Q86XE3 530 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 PPTC7Q8NI37 304 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 MTIF3Q9H2K0 278 aaKnown RBP11.06□□□□□ -0.64
MSH5-218ENST00000494646 GTF2IRD1Q9UHL9 959 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 BRPF3Q9ULD4 1205 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 TELO2Q9Y4R8 837 aa11.06□□□□□ -0.64
MSH5-218ENST00000494646 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 HAS3O00219 553 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 VCANP13611 3396 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 SP4Q02446 784 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 HIC1Q14526 733 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 UBE2SQ16763 222 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
MSH5-218ENST00000494646 SESTD1Q86VW0 696 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 MAFAQ8NHW3 353 aaPredicted RBP11.05□□□□□ -0.64
MSH5-218ENST00000494646 DHX38Q92620 1227 aaKnown RBP11.05□□□□□ -0.64
MSH5-218ENST00000494646 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 NAP1L2Q9ULW6 460 aaPredicted RBP11.05□□□□□ -0.64
MSH5-218ENST00000494646 YBX2Q9Y2T7 364 aaKnown RBP11.05□□□□□ -0.64
MSH5-218ENST00000494646 CHD7Q9P2D1 2997 aa11.05□□□□□ -0.64
MSH5-218ENST00000494646 REV3LO60673 3130 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 NOP56O00567 594 aaKnown RBP11.04□□□□□ -0.64
MSH5-218ENST00000494646 ZBTB43O43298 467 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 F2P00734 622 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 ACTN1P12814 892 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 ICAM3P32942 547 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 GPNMBQ14956 572 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
MSH5-218ENST00000494646 APOA5Q6Q788 366 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 TMTC3Q6ZXV5 915 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 HEATR3Q7Z4Q2 680 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 SGMS1Q86VZ5 419 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms