RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FERMT2Q96AC1 680 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 FRMPD3Q5JV73 1810 aa15.47■□□□□ 0.07
COL1A1-208ENST00000494334 FIBPO43427 364 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 CYP3A4P08684 503 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 UBA1P22314 1058 aaKnown RBP15.46■□□□□ 0.07
COL1A1-208ENST00000494334 ACLYP53396 1101 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 HMGN5P82970 282 aaKnown RBP15.46■□□□□ 0.07
COL1A1-208ENST00000494334 ARHGAP1Q07960 439 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 CYP2W1Q8TAV3 490 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 GPRASP2Q96D09 838 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 MXRA8Q9BRK3 442 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 JADE2Q9NQC1 790 aa15.46■□□□□ 0.07
COL1A1-208ENST00000494334 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-208ENST00000494334 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 A6NJR5 290 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 MAFGO15525 162 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 EDIL3O43854 480 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 ZEB2O60315 1214 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 GGPS1O95749 300 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 CEP55Q53EZ4 464 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 CELF3Q5SZQ8 465 aaKnown RBP15.45■□□□□ 0.06
COL1A1-208ENST00000494334 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 DHX37Q8IY37 1157 aaKnown RBP15.45■□□□□ 0.06
COL1A1-208ENST00000494334 OXER1Q8TDS5 423 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 EMID1Q96A84 441 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-208ENST00000494334 BCAS3Q9H6U6 928 aa15.45■□□□□ 0.06
COL1A1-208ENST00000494334 FAM86B1E9PN63 330 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 MEIS1O00470 390 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 SORBS3O60504 671 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 ATP9AO75110 1047 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 FAM86B2P0C5J1 330 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 ZNF76P36508 570 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 CPT1AP50416 773 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 FOSBP53539 338 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 ATN1P54259 1190 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-208ENST00000494334 MTMR1Q13613 665 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 NEDD9Q14511 834 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 KRT40Q6A162 431 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 SLC39A5Q6ZMH5 540 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 FAM184AQ8NB25 1140 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 TBCKQ8TEA7 893 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 AFG1LQ8WV93 481 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 CDHR1Q96JP9 859 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
COL1A1-208ENST00000494334 MMP1P03956 469 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 MMP3P08254 477 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 ARP10275 920 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 KCNA2P16389 499 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 CIITAP33076 1130 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 USP11P51784 963 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 TRIM29Q14134 588 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 LRRC26Q2I0M4 334 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 BRDTQ58F21 947 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-208ENST00000494334 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 KRT25Q7Z3Z0 450 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 DPF3Q92784 378 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 GLT1D1Q96MS3 346 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 MLXIPQ9HAP2 919 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 STARD7Q9NQZ5 370 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 KCNH7Q9NS40 1196 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 KIAA1217Q5T5P2 1943 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 ELP1O95163 1332 aa15.43■□□□□ 0.06
COL1A1-208ENST00000494334 IGLV3-22A0A075B6J6 115 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 BTBD18B2RXH4 712 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 CABYRO75952 493 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 MYL3P08590 195 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 KRT2P35908 639 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 PURAQ00577 322 aaKnown RBP15.42■□□□□ 0.06
COL1A1-208ENST00000494334 GUCY1B3Q02153 619 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 NR5A1Q13285 461 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 CUL4AQ13619 759 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL1A1-208ENST00000494334 HSDL1Q3SXM5 330 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 EARS2Q5JPH6 523 aaKnown RBP15.42■□□□□ 0.06
COL1A1-208ENST00000494334 C1orf53Q5VUE5 145 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 PLA2G4DQ86XP0 818 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 PPTC7Q8NI37 304 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 TNFRSF25Q93038 417 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 SPATA33Q96N06 139 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 POLR3EQ9NVU0 708 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 PKD2L1Q9P0L9 805 aa15.42■□□□□ 0.06
COL1A1-208ENST00000494334 CCDC194A0A1B0GVG4 234 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 SNX17Q15036 470 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 INF2Q27J81 1249 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 PIK3AP1Q6ZUJ8 805 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 DIS3L2Q8IYB7 885 aaKnown RBP15.41■□□□□ 0.06
COL1A1-208ENST00000494334 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
COL1A1-208ENST00000494334 FBXO18Q8NFZ0 1043 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 VTI1AQ96AJ9 217 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 AGO4Q9HCK5 861 aaKnown RBP15.41■□□□□ 0.06
COL1A1-208ENST00000494334 TELO2Q9Y4R8 837 aa15.41■□□□□ 0.06
COL1A1-208ENST00000494334 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.41■□□□□ 0.06
COL1A1-208ENST00000494334 A0A0U1RQG5 324 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms