RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 EFEMP2O95967 443 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 MPOP05164 745 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 PDE6AP16499 860 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 CPEP16870 476 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 RAB3GAP1Q15042 981 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 CHRNA2Q15822 529 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 KCNMB1Q16558 191 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 TMEM177Q53S58 311 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 FYB2Q5VWT5 728 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 MPZL3Q6UWV2 235 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 OSTM1Q86WC4 334 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 DCP2Q8IU60 420 aaKnown RBP5.53□□□□□ -1.52
CLK1-213ENST00000492793 ANKRD13AQ8IZ07 590 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 USP7Q93009 1102 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 CELF4Q9BZC1 486 aaKnown RBP5.53□□□□□ -1.52
CLK1-213ENST00000492793 SP110Q9HB58 689 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 FBLN5Q9UBX5 448 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 ADGRE2Q9UHX3 823 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 NUDT5Q9UKK9 219 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 CBLCQ9ULV8 474 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 SIT1Q9Y3P8 196 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 X6R8D5 127 aa5.53□□□□□ -1.52
CLK1-213ENST00000492793 MAFKO60675 156 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 NPTXRO95502 500 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 CKMP06732 381 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 KCNA6P17658 529 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 IL2P60568 153 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 SKOR2Q2VWA4 1001 aaPredicted RBP5.52□□□□□ -1.53
CLK1-213ENST00000492793 ARHGAP36Q6ZRI8 547 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 OTOP3Q7RTS5 596 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 RNF180Q86T96 592 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 NXPE1Q8N323 547 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 FLAD1Q8NFF5 587 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 OR2W6PQ8NHA6 318 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 YBX2Q9Y2T7 364 aaKnown RBP5.52□□□□□ -1.53
CLK1-213ENST00000492793 NOP58Q9Y2X3 529 aaKnown RBP5.52□□□□□ -1.53
CLK1-213ENST00000492793 NUB1Q9Y5A7 615 aa5.52□□□□□ -1.53
CLK1-213ENST00000492793 PTPDC1A2A3K4 754 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 HGSO14964 777 aaPredicted RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 SLC27A2O14975 620 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 NKRFO15226 690 aaKnown RBP eCLIP5.51□□□□□ -1.53
CLK1-213ENST00000492793 DBHP09172 617 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 JAM2P57087 298 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 GPR19Q15760 415 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 ATG4DQ86TL0 474 aaPredicted RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 ZSWIM9Q86XI8 627 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 PTRH1Q86Y79 214 aaKnown RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 CHST14Q8NCH0 376 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.53
CLK1-213ENST00000492793 SHISA4Q96DD7 197 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 INTS4Q96HW7 963 aaKnown RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 GPR101Q96P66 508 aaPredicted RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 PUS7Q96PZ0 661 aaKnown RBP5.51□□□□□ -1.53
CLK1-213ENST00000492793 YIPF4Q9BSR8 244 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 MTFR1LQ9H019 292 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 SLC6A17Q9H1V8 727 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 SLC6A20Q9NP91 592 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 MCM8Q9UJA3 840 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 DSEQ9UL01 958 aa5.51□□□□□ -1.53
CLK1-213ENST00000492793 SLC12A8A0AV02 714 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 CBX4O00257 560 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 SCDO00767 359 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 HIP1RO75146 1068 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 CYBBP04839 570 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 GLI4P10075 376 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 POU3F2P20265 443 aaPredicted RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 AMPD3Q01432 767 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 NR1I3Q14994 352 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 SEPT7Q16181 437 aaKnown RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 PAQR3Q6TCH7 311 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 OVCH1Q7RTY7 1134 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 RBM12BQ8IXT5 1001 aaKnown RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 Q8N1Y9 231 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 NETO2Q8NC67 525 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 SEC14L1Q92503 715 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 PEX11GQ96HA9 241 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 FAM126AQ9BYI3 521 aaPredicted RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 CD244Q9BZW8 370 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 TNFRSF12AQ9NP84 129 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 THG1LQ9NWX6 298 aaKnown RBP5.5□□□□□ -1.53
CLK1-213ENST00000492793 PALD1Q9ULE6 856 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 PCDHB4Q9Y5E5 795 aa5.5□□□□□ -1.53
CLK1-213ENST00000492793 FAM83GA6ND36 823 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 WNT9AO14904 365 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 GLI1P08151 1106 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 HMGB1P09429 215 aaKnown RBP5.49□□□□□ -1.53
CLK1-213ENST00000492793 IRAK1P51617 712 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 EVA1CP58658 441 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 TMEM62Q0P6H9 643 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 FAM50AQ14320 339 aaKnown RBP5.49□□□□□ -1.53
CLK1-213ENST00000492793 ARHGAP44Q17R89 818 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 STRA8Q7Z7C7 330 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms