RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ICAM3P32942 547 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 PSEN2P49810 448 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 MFSD10Q14728 455 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 HSDL1Q3SXM5 330 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 RNF20Q5VTR2 975 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 CREB3L3Q68CJ9 461 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 XRRA1Q6P2D8 792 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 SPATA33Q96N06 139 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 GAS2L1Q99501 681 aaPredicted RBP15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 PRUNE2Q8WUY3 3088 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 MYH6P13533 1939 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 KIAA1217Q5T5P2 1943 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 BAIAP3O94812 1187 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 SELPP16109 830 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 PTK7Q13308 1070 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 CUL5Q93034 780 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 SLC9A7Q96T83 725 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 FTOQ9C0B1 505 aaKnown RBP eCLIP15.08■□□□□ 0
ATPAF2-207ENST00000488753 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 MLXIPQ9HAP2 919 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 HDAC6Q9UBN7 1215 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0
ATPAF2-207ENST00000488753 SLC12A7Q9Y666 1083 aa15.08■□□□□ 0
ATPAF2-207ENST00000488753 SPATA31C2B4DYI2 1134 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 ZNF286BP0CG31 522 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 MRPS9P82933 396 aaKnown RBP15.07■□□□□ 0
ATPAF2-207ENST00000488753 SP2Q02086 613 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 NEDD9Q14511 834 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 LRRC8DQ7L1W4 858 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 SGMS1Q86VZ5 419 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 SRBD1Q8N5C6 995 aaKnown RBP15.07■□□□□ 0
ATPAF2-207ENST00000488753 SMARCC2Q8TAQ2 1214 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
ATPAF2-207ENST00000488753 PRDM12Q9H4Q4 367 aa15.07■□□□□ 0
ATPAF2-207ENST00000488753 MEIS2O14770 477 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 FIBPO43427 364 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 CXCL10P02778 98 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 CKBP12277 381 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 RABGGTBP53611 331 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 PCNX4Q63HM2 1172 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 METTL7BQ6UX53 244 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 SENP7Q9BQF6 1050 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 C16orf70Q9BSU1 422 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 ALG1Q9BT22 464 aa15.06■□□□□ 0
ATPAF2-207ENST00000488753 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
ATPAF2-207ENST00000488753 CHD9Q3L8U1 2897 aa15.05■□□□□ 0
ATPAF2-207ENST00000488753 PLEKHA8P1O95397 391 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 TSGA10IPQ3SY00 556 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 PPP2R2DQ66LE6 453 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 TEX2Q8IWB9 1127 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 FANCBQ8NB91 859 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 GPKOWQ92917 476 aaPredicted RBP eCLIP15.05■□□□□ -0
ATPAF2-207ENST00000488753 USP26Q9BXU7 913 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 PSTPIP2Q9H939 334 aa15.05■□□□□ -0
ATPAF2-207ENST00000488753 BAZ2BQ9UIF8 2168 aaKnown RBP15.05■□□□□ -0
ATPAF2-207ENST00000488753 TANC1Q9C0D5 1861 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 KIF28PB7ZC32 967 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 H3BRB1 525 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 NOP56O00567 594 aaKnown RBP15.04■□□□□ -0
ATPAF2-207ENST00000488753 EFCAB14O75071 495 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 LGALS2P05162 132 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 HOXC8P31273 242 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 SEMA3FQ13275 785 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
ATPAF2-207ENST00000488753 GPNMBQ14956 572 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 TRIM71Q2Q1W2 868 aaKnown RBP15.04■□□□□ -0
ATPAF2-207ENST00000488753 CNKSR3Q6P9H4 555 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 USP17L6PQ6QN14 398 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 SYNE3Q6ZMZ3 975 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 TMTC3Q6ZXV5 915 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 NLRX1Q86UT6 975 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 SERINC5Q86VE9 423 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 HERC6Q8IVU3 1022 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 GIMAP8Q8ND71 665 aaPredicted RBP15.04■□□□□ -0
ATPAF2-207ENST00000488753 CDHR1Q96JP9 859 aa15.04■□□□□ -0
ATPAF2-207ENST00000488753 TUT1Q9H6E5 874 aaKnown RBP15.04■□□□□ -0
ATPAF2-207ENST00000488753 EMSYQ7Z589 1322 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 NBNO60934 754 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 MYOGP15173 224 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 RXRAP19793 462 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 ADGRE1Q14246 886 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 KRT32Q14532 448 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 MICU3Q86XE3 530 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 USP38Q8NB14 1042 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 GPRASP2Q96D09 838 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
ATPAF2-207ENST00000488753 NEK1Q96PY6 1258 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 GPR20Q99678 358 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 RBM28Q9NW13 759 aaKnown RBP15.03■□□□□ -0
ATPAF2-207ENST00000488753 RTEL1Q9NZ71 1219 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 CHD7Q9P2D1 2997 aa15.03■□□□□ -0
ATPAF2-207ENST00000488753 ABHD14A-ACY1A0A1B0GW23 586 aa15.02■□□□□ -0
ATPAF2-207ENST00000488753 C17orf102A2RUQ5 167 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms