RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CTNNB1P35222 781 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 SLC16A2P36021 539 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 ARHGAP1Q07960 439 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 MFSD10Q14728 455 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 STXBP2Q15833 593 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 TCTN1Q2MV58 587 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 PLEKHG4Q58EX7 1191 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 CCDC62Q6P9F0 684 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 TRIM67Q6ZTA4 783 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 SEPT14Q6ZU15 432 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 DBF4BQ8NFT6 615 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 CLEC4DQ8WXI8 215 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 SEPT8Q92599 483 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 KAT2BQ92831 832 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 APBB2Q92870 758 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
PDPN-205ENST00000487038 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
PDPN-205ENST00000487038 DOCK5Q9H7D0 1870 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 C5orf67F2Z3F1 127 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 NMT2O60551 498 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 CAND2O75155 1236 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 UPP2O95045 317 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 ZNF286BP0CG31 522 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 TOP1P11387 765 aaKnown RBP8.98□□□□□ -0.97
PDPN-205ENST00000487038 THPOP40225 353 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 NDUFV1P49821 464 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 CLUL1Q15846 466 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 LY6KQ17RY6 165 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 TRIM71Q2Q1W2 868 aaKnown RBP8.98□□□□□ -0.97
PDPN-205ENST00000487038 TTBK2Q6IQ55 1244 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 TRAF7Q6Q0C0 670 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 FBXL6Q8N531 539 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 FIBCD1Q8N539 461 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 RGS22Q8NE09 1264 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 PPTC7Q8NI37 304 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 PANK1Q8TE04 598 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 NSUN6Q8TEA1 469 aaKnown RBP8.98□□□□□ -0.97
PDPN-205ENST00000487038 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 IWS1Q96ST2 819 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 IFIH1Q9BYX4 1025 aaKnown RBP8.98□□□□□ -0.97
PDPN-205ENST00000487038 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 IL17RBQ9NRM6 502 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 CD207Q9UJ71 328 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.98□□□□□ -0.97
PDPN-205ENST00000487038 MRVI1Q9Y6F6 885 aa8.98□□□□□ -0.97
PDPN-205ENST00000487038 TPRP12270 2363 aaKnown RBP8.98□□□□□ -0.97
PDPN-205ENST00000487038 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 NCOR2Q9Y618 2525 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 CCER2I3L3R5 266 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 HAS3O00219 553 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 TBX10O75333 385 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 MMP1P03956 469 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 LTBRP36941 435 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 NOVP48745 357 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 TCF15Q12870 199 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 MKRN4PQ13434 485 aaPredicted RBP8.97□□□□□ -0.97
PDPN-205ENST00000487038 MBTPS1Q14703 1052 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 USH1GQ495M9 461 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 SERINC5Q86VE9 423 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 MCF2L2Q86YR7 1114 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 ATOH1Q92858 354 aaPredicted RBP8.97□□□□□ -0.97
PDPN-205ENST00000487038 TOMM22Q9NS69 142 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 ABCB11O95342 1321 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 ADGRA3Q8IWK6 1321 aa8.97□□□□□ -0.97
PDPN-205ENST00000487038 LOXHD1Q8IVV2 1947 aa8.96□□□□□ -0.97
PDPN-205ENST00000487038 C17orf102A2RUQ5 167 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 ORC4O43929 436 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 PDHBP11177 359 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 NUBP1P53384 320 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 ZXDAP98168 799 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 CTDSPL2Q05D32 466 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 SIGLEC14Q08ET2 396 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 HYAL1Q12794 435 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 GPATCH4Q5T3I0 446 aaKnown RBP8.96□□□□□ -0.98
PDPN-205ENST00000487038 IER5LQ5T953 404 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 ARHGEF16Q5VV41 709 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 KCNV1Q6PIU1 500 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 SIRT2Q8IXJ6 389 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 ATP6V0A1Q93050 837 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 WNT8BQ93098 351 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 RMDN3Q96TC7 470 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 TMEM47Q9BQJ4 181 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 FSD1Q9BTV5 496 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 ZBTB40Q9NUA8 1239 aa8.96□□□□□ -0.98
PDPN-205ENST00000487038 DDX41Q9UJV9 622 aaKnown RBP8.96□□□□□ -0.98
PDPN-205ENST00000487038 FSD2A1L4K1 749 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
PDPN-205ENST00000487038 PPFIA4O75335 1185 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 EIF3JO75822 258 aaKnown RBP8.95□□□□□ -0.98
PDPN-205ENST00000487038 CTSHP09668 335 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 GNAT1P11488 350 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 DLX2Q07687 328 aaPredicted RBP8.95□□□□□ -0.98
PDPN-205ENST00000487038 ZNF543Q08ER8 600 aa8.95□□□□□ -0.98
PDPN-205ENST00000487038 ERMP1Q7Z2K6 904 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms