RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 GPR27Q9NS67 375 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PPARGC1AQ9UBK2 798 aaKnown RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 RAPGEFL1Q9UHV5 662 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 CNOT6Q9ULM6 557 aaKnown RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PLAAQ9Y263 795 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 TAF6LQ9Y6J9 622 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 A0A1B0GTL3 188 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 ZC3H12DA2A288 527 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 OTOL1A6NHN0 477 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 WNT9AO14904 365 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 CKMP06732 381 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 POU3F2P20265 443 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 LTBRP36941 435 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 BUD31P41223 144 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 NOP2P46087 812 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 KCNJ6P48051 423 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 PRR5P85299 388 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 AMPD3Q01432 767 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 LAPTM5Q13571 262 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 ZNF460Q14592 562 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 RAB3GAP1Q15042 981 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 CWF19L1Q69YN2 538 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 CIAPIN1Q6FI81 312 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 LBX2Q6XYB7 198 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 USP53Q70EK8 1073 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 MAMDC2Q7Z304 686 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 DHX37Q8IY37 1157 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 NIM1KQ8IY84 436 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 RPUSD2Q8IZ73 545 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 ZSCAN18Q8TBC5 510 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 MFSD3Q96ES6 412 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 NOX5Q96PH1 765 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 PHF20Q9BVI0 1012 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 TARS2Q9BW92 718 aaKnown RBP3.38□□□□□ -1.87
ITGB1-213ENST00000484088 PDLIM7Q9NR12 457 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 IFT57Q9NWB7 429 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 SFMBT1Q9UHJ3 866 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 WASF3Q9UPY6 502 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 SIT1Q9Y3P8 196 aa3.38□□□□□ -1.87
ITGB1-213ENST00000484088 NPHP3-ACAD11A0A0J9YXS1 232 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 SSU72P8A0A1W2PR75 194 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 ANKRD62A6NC57 917 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 MEFVO15553 781 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 BUB1BO60566 1050 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 CRTAMO95727 393 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 CYBBP04839 570 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 ASGR2P07307 311 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 BMP7P18075 431 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 PAMP19021 973 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 SEPHS1P49903 392 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 MECP2P51608 486 aaKnown RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 GPR85P60893 370 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 KCNAB2Q13303 367 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 SEPT7Q16181 437 aaKnown RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 HABP4Q5JVS0 413 aaKnown RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 HLA-DQA1Q5Y7H0 255 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 PAQR3Q6TCH7 311 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 CYP2R1Q6VVX0 501 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 KRT26Q7Z3Y9 468 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 PCDH19Q8TAB3 1148 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 FEZF2Q8TBJ5 459 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 ZNF526Q8TF50 670 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 DIO2Q92813 273 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 ZFYVE21Q9BQ24 234 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 INTS7Q9NVH2 962 aaKnown RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 SPATA6Q9NWH7 488 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 GULP1Q9UBP9 304 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 NDOR1Q9UHB4 597 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 RWDD3Q9Y3V2 267 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 PCDHA9Q9Y5H5 950 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 TNPO3Q9Y5L0 923 aaKnown RBP3.37□□□□□ -1.87
ITGB1-213ENST00000484088 NCANO14594 1321 aa3.37□□□□□ -1.87
ITGB1-213ENST00000484088 MPOP05164 745 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 ENDOUP21128 410 aaKnown RBP3.36□□□□□ -1.87
ITGB1-213ENST00000484088 PMLP29590 882 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 THBS2P35442 1172 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 STAT3P40763 770 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 AFF3P51826 1226 aaKnown RBP3.36□□□□□ -1.87
ITGB1-213ENST00000484088 CORO7P57737 925 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 NFKB2Q00653 900 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 RTP5Q14D33 572 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 PCBP1Q15365 356 aaKnown RBP eCLIP3.36□□□□□ -1.87
ITGB1-213ENST00000484088 CREB3L3Q68CJ9 461 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 FSTL4Q6MZW2 842 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 STRA8Q7Z7C7 330 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 LRRTM3Q86VH5 581 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 AFAP1L2Q8N4X5 818 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 FNIP1Q8TF40 1166 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 DDX1Q92499 740 aaKnown RBP3.36□□□□□ -1.87
ITGB1-213ENST00000484088 ORAI3Q9BRQ5 295 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 SIRT5Q9NXA8 310 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 MAGEC2Q9UBF1 373 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-213ENST00000484088 PRKAB1Q9Y478 270 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 PCDHA8Q9Y5H6 950 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 IRAK3Q9Y616 596 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 X6R8D5 127 aa3.36□□□□□ -1.87
ITGB1-213ENST00000484088 TCRBV5S4A2TA0A5A2 114 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 TRAF5O00463 557 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 PRRG2O14669 202 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms