RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 CCSAPQ6IQ19 270 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-219ENST00000479941 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-219ENST00000479941 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 JADE2Q9NQC1 790 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 GJB4Q9NTQ9 266 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 PHF24Q9UPV7 400 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-219ENST00000479941 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 MYADML2A6NDP7 307 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 A6NJR5 290 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 CTAGE5O15320 804 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 MMP1P03956 469 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 ASGR1P07306 291 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 KRT2P35908 639 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 ZNF76P36508 570 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 USP11P51784 963 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 ACLYP53396 1101 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 MLLT1Q03111 559 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 MTMR1Q13613 665 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 CUL4AQ13619 759 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 KCNA10Q16322 511 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 KRT40Q6A162 431 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 COPS5Q92905 334 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 SNX21Q969T3 373 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 C8orf76Q96K31 380 aa12.34□□□□□ -0.43
ATG4B-219ENST00000479941 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-219ENST00000479941 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 MEIS1O00470 390 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 CABYRO75952 493 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 GGPS1O95749 300 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 PTGS1P23219 599 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 CIITAP33076 1130 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 BEX3Q00994 111 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 SP2Q02086 613 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 NONOQ15233 471 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATG4B-219ENST00000479941 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATG4B-219ENST00000479941 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
ATG4B-219ENST00000479941 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 TBCKQ8TEA7 893 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
ATG4B-219ENST00000479941 A0A1W2PQ45 241 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-219ENST00000479941 A0A1W2PQY0 241 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-219ENST00000479941 KPNA6O60684 536 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-219ENST00000479941 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-219ENST00000479941 METTL7BQ6UX53 244 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 DIS3L2Q8IYB7 885 aaKnown RBP12.32□□□□□ -0.44
ATG4B-219ENST00000479941 PPTC7Q8NI37 304 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 CYP2W1Q8TAV3 490 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 ELP1O95163 1332 aa12.32□□□□□ -0.44
ATG4B-219ENST00000479941 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 ATP9AO75110 1047 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 MMP3P08254 477 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 KCNA2P16389 499 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 GJB2P29033 226 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 FOSBP53539 338 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 NR5A1Q13285 461 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 DGKDQ16760 1214 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 INF2Q27J81 1249 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 PIK3AP1Q6ZUJ8 805 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 PLA2G4DQ86XP0 818 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
ATG4B-219ENST00000479941 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
ATG4B-219ENST00000479941 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
ATG4B-219ENST00000479941 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
ATG4B-219ENST00000479941 EDIL3O43854 480 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms