RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 ZNF655Q8N720 491 aaPredicted RBP7.27□□□□□ -1.25
UPF3A-205ENST00000479712 SLC7A14Q8TBB6 771 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 PTPRN2Q92932 1015 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 C1orf159Q96HA4 380 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 TRIT1Q9H3H1 467 aaKnown RBP7.27□□□□□ -1.25
UPF3A-205ENST00000479712 CAAP1Q9H8G2 361 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 INTS7Q9NVH2 962 aaKnown RBP7.27□□□□□ -1.25
UPF3A-205ENST00000479712 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 PIK3R4Q99570 1358 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 MBD5Q9P267 1494 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 TULP4Q9NRJ4 1543 aa7.27□□□□□ -1.25
UPF3A-205ENST00000479712 F13BP05160 661 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 SRFP11831 508 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 CYP4F3Q08477 520 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 CT47A1Q5JQC4 288 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-205ENST00000479712 CNNM4Q6P4Q7 775 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 PTF1AQ7RTS3 328 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 MAMDC2Q7Z304 686 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-205ENST00000479712 LRRTM3Q86VH5 581 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 RPUSD2Q8IZ73 545 aaKnown RBP7.26□□□□□ -1.25
UPF3A-205ENST00000479712 GSTCDQ8NEC7 633 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 TCTN2Q96GX1 697 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 MCMBPQ9BTE3 642 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 TARS2Q9BW92 718 aaKnown RBP7.26□□□□□ -1.25
UPF3A-205ENST00000479712 TRIM39Q9HCM9 518 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
UPF3A-205ENST00000479712 RGPD3A6NKT7 1758 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 RGPD4Q7Z3J3 1758 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 ABCA3Q99758 1704 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 GSG1L2A8MUP6 293 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 AURKAO14965 403 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 DNAJC8O75937 253 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 BMP8BP34820 402 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 NOP2P46087 812 aaKnown RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 CTCFP49711 727 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 OXCT1P55809 520 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 FSTL1Q12841 308 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 NFIAQ12857 509 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 FAM181AQ8N9Y4 354 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 COPS5Q92905 334 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 DBNDD2Q9BQY9 259 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 METTL22Q9BUU2 404 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 DUSP15Q9H1R2 295 aaPredicted RBP7.25□□□□□ -1.25
UPF3A-205ENST00000479712 RNF112Q9ULX5 631 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 ST14Q9Y5Y6 855 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 U3KQE9 123 aa7.25□□□□□ -1.25
UPF3A-205ENST00000479712 FYCO1Q9BQS8 1478 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 LMTK2Q8IWU2 1503 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.24□□□□□ -1.25
UPF3A-205ENST00000479712 C2orf71A6NGG8 1288 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 THBDP07204 575 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 IFNGR1P15260 489 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 STYK1Q6J9G0 422 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 FGD2Q7Z6J4 655 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 RNF180Q86T96 592 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 PPIL6Q8IXY8 311 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 KREMEN2Q8NCW0 462 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 DCAF4Q8WV16 495 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 FCRL3Q96P31 734 aaPredicted RBP7.24□□□□□ -1.25
UPF3A-205ENST00000479712 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 OSBPL1AQ9BXW6 950 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 MKNK2Q9HBH9 465 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 LRRC4CQ9HCJ2 640 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 GPRC5CQ9NQ84 441 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 TPSG1Q9NRR2 321 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 ATG3Q9NT62 314 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 PRAG1Q86YV5 1406 aa7.24□□□□□ -1.25
UPF3A-205ENST00000479712 GCC2Q8IWJ2 1684 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 TOPAZ1Q8N9V7 1692 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 WDR64B1ANS9 1081 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 AQP7O14520 342 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 OPA1O60313 960 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 CEACAM5P06731 702 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 FURINP09958 794 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 VAV1P15498 845 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 POLD1P28340 1107 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 SEPHS1P49903 392 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 NKPD1Q17RQ9 610 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 DENND5AQ6IQ26 1287 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 TSPYL5Q86VY4 417 aaPredicted RBP7.23□□□□□ -1.25
UPF3A-205ENST00000479712 KSR1Q8IVT5 923 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 SPACA3Q8IXA5 215 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 PPM1KQ8N3J5 372 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 UBR7Q8N806 425 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 SHKBP1Q8TBC3 707 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 DDX1Q92499 740 aaKnown RBP7.23□□□□□ -1.25
UPF3A-205ENST00000479712 ATP8A1Q9Y2Q0 1164 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 TRAF6Q9Y4K3 522 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 TNPO3Q9Y5L0 923 aaKnown RBP7.23□□□□□ -1.25
UPF3A-205ENST00000479712 ARHGAP31Q2M1Z3 1444 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 SPATA31A3Q5VYP0 1347 aa7.23□□□□□ -1.25
UPF3A-205ENST00000479712 SSU72P8A0A1W2PR75 194 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 H3BS24 57 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 PLSCR1O15162 318 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 GSC2O15499 205 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 ZNF205O95201 554 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms