RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PHKA1P46020 1223 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 USP11P51784 963 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 ASPHQ12797 758 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 KCNH2Q12809 1159 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 LAMB3Q13751 1172 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 RASA3Q14644 834 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 EZH2Q15910 746 aaKnown RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 KLHL40Q2TBA0 621 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 PRR16Q569H4 304 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 PLEKHH3Q7Z736 793 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 GPBP1Q86WP2 473 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 ARFGAP2Q8N6H7 521 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 NEDD1Q8NHV4 660 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 LSM7Q9UK45 103 aaKnown RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 AP3B1O00203 1094 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 IPO5O00410 1097 aaKnown RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CYBBP04839 570 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 PTK2Q05397 1052 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 MXD4Q14582 209 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 PPP2R5DQ14738 602 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 SNRNP48Q6IEG0 339 aaKnown RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 SDE2Q6IQ49 451 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CC2D1AQ6P1N0 951 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 ARHGAP18Q8N392 663 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 NBPF15Q8N660 670 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CCHCR1Q8TD31 782 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 SKA1Q96BD8 255 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 TRERF1Q96PN7 1200 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 EHD4Q9H223 541 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF70Q9UC06 446 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 KCNH3Q9ULD8 1083 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 RWDD3Q9Y3V2 267 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 EGFRP00533 1210 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 HARSP12081 509 aaKnown RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 AFMP43652 599 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 GMPSP49915 693 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 LACTBP83111 547 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 SCARF1Q14162 830 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 MAPK6Q16659 721 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 C10orf76Q5T2E6 689 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 ENOSF1Q7L5Y1 443 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CCDC50Q8IVM0 306 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 OR6J1Q8NGC5 347 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-215ENST00000474539 SEPT8Q92599 483 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 OTUD5Q96G74 571 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CEP170P1Q96L14 293 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 OLFML3Q9NRN5 406 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 HSPA8P11142 646 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RAB27AP51159 221 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 AK2P54819 239 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PCBP1Q15365 356 aaKnown RBP eCLIP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MAPRE1Q15691 268 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF174Q15697 407 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SEPT14Q6ZU15 432 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TAX1BP1Q86VP1 789 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SRRM1Q8IYB3 904 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 DCP1BQ8IZD4 617 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RAB42Q8N4Z0 105 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 P3H4Q92791 437 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 EFCC1Q9HA90 598 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 HOMER3Q9NSC5 361 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ARMCX3Q9UH62 379 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 FKTNO75072 461 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RALAP11233 206 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 XRCC6P12956 609 aaKnown RBP eCLIP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 IFNAR1P17181 557 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 FBLN1P23142 703 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PSMC2P35998 433 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 STAT1P42224 750 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PLCB3Q01970 1234 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 NBPF20Q3BBV1 942 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RSRC2Q7L4I2 434 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PALM2Q8IXS6 379 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CSGALNACT2Q8N6G5 542 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RNF169Q8NCN4 708 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PROCA1Q8NCQ7 364 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ATP2A3Q93084 1043 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 DHTKD1Q96HY7 919 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RPGRIP1Q96KN7 1286 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MRPL9Q9BYD2 267 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CCDC68Q9H2F9 335 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MRPL47Q9HD33 250 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MSRAQ9UJ68 235 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 NFU1Q9UMS0 254 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TMX2Q9Y320 296 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 IPPQ9Y573 584 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 DISP2A7MBM2 1401 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 INO80B-WBP1J3KQ70 363 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SPOPO43791 374 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PPP6R2O75170 966 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 GH2P01242 217 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 IGBP1P78318 339 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms