RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CLDND1Q9NY35 253 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 NPFFR2Q9Y5X5 522 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 DUSP10Q9Y6W6 482 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 DGKIO75912 1065 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 ADRB1P08588 477 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 STAT5AP42229 794 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 MAP4K2Q12851 820 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 FAM26FQ5R3K3 315 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 STEAP3Q658P3 488 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 HNRNPLLQ8WVV9 542 aaKnown RBP7.62□□□□□ -1.19
CD46-213ENST00000471987 BORCS6Q96GS4 357 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 EPB41L1Q9H4G0 881 aa7.62□□□□□ -1.19
CD46-213ENST00000471987 K7ESM1 405 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 GRIA2P42262 883 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 KIAA2012Q0VF49 1180 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 CR1LQ2VPA4 569 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 EMC4Q5J8M3 183 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 ANKS3Q6ZW76 656 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 STK32CQ86UX6 486 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 ST7Q9NRC1 585 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 PCDHB4Q9Y5E5 795 aa7.61□□□□□ -1.19
CD46-213ENST00000471987 A0A1W2PQU0 124 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 TADA3O75528 432 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 DDR2Q16832 855 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 FAM124AQ86V42 546 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 CELF2-AS1Q8N7Q2 184 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.6□□□□□ -1.19
CD46-213ENST00000471987 TOE1Q96GM8 510 aaKnown RBP7.6□□□□□ -1.19
CD46-213ENST00000471987 GMLQ99445 158 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 IER2Q9BTL4 223 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 DTLQ9NZJ0 730 aa7.6□□□□□ -1.19
CD46-213ENST00000471987 TCRBV5S2A0A599 114 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 MAFKO60675 156 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 NFKB2Q00653 900 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
CD46-213ENST00000471987 PRR31Q5SQ13 230 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 ARRDC4Q8NCT1 418 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 ZNF428Q96B54 188 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 SGSM3Q96HU1 749 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 GPR27Q9NS67 375 aa7.59□□□□□ -1.19
CD46-213ENST00000471987 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 MROH6A6NGR9 719 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 MCTP2Q6DN12 878 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 BORAQ6PGQ7 559 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 RSPO2Q6UXX9 243 aaPredicted RBP7.58□□□□□ -1.2
CD46-213ENST00000471987 LGI4Q8N135 537 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 PHOSPHO1Q8TCT1 267 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 SMOC1Q9H4F8 434 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 MYOTQ9UBF9 498 aa7.58□□□□□ -1.2
CD46-213ENST00000471987 KRIT1O00522 736 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 DDX3XO00571 662 aaKnown RBP eCLIP7.57□□□□□ -1.2
CD46-213ENST00000471987 KLF4O43474 513 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 ITGB3P05106 788 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 ADAM9Q13443 819 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 ZNF827Q17R98 1081 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 TEPPQ6URK8 271 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 USP53Q70EK8 1073 aa7.57□□□□□ -1.2
CD46-213ENST00000471987 DLX3O60479 287 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 CYP7B1O75881 506 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 PRAMEF18Q5VWM3 479 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 HHIPL2Q6UWX4 724 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 TXNDC5Q8NBS9 432 aaKnown RBP7.56□□□□□ -1.2
CD46-213ENST00000471987 LCORQ96JN0 433 aaPredicted RBP7.56□□□□□ -1.2
CD46-213ENST00000471987 CLIC6Q96NY7 704 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 AARSD1Q9BTE6 412 aaKnown RBP7.56□□□□□ -1.2
CD46-213ENST00000471987 PHF20Q9BVI0 1012 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 JAG2Q9Y219 1238 aa7.56□□□□□ -1.2
CD46-213ENST00000471987 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
CD46-213ENST00000471987 TRIM48Q8IWZ4 208 aa7.55□□□□□ -1.2
CD46-213ENST00000471987 ST13P5Q8NFI4 369 aaPredicted RBP7.55□□□□□ -1.2
CD46-213ENST00000471987 WRNIP1Q96S55 665 aa7.55□□□□□ -1.2
CD46-213ENST00000471987 TMEM209Q96SK2 561 aa7.55□□□□□ -1.2
CD46-213ENST00000471987 SLC6A20Q9NP91 592 aa7.55□□□□□ -1.2
CD46-213ENST00000471987 PLATP00750 562 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 LRG1P02750 347 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 FGFR1P11362 822 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 ZNF28P17035 718 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 RBM25P49756 843 aaKnown RBP7.54□□□□□ -1.2
CD46-213ENST00000471987 DCAF4Q8WV16 495 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.2
CD46-213ENST00000471987 L2HGDHQ9H9P8 463 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 ASH2LQ9UBL3 628 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 INVSQ9Y283 1065 aa7.54□□□□□ -1.2
CD46-213ENST00000471987 PRODHO43272 600 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 MSCO60682 206 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 CYP1A1P04798 512 aaPredicted RBP7.53□□□□□ -1.2
CD46-213ENST00000471987 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
CD46-213ENST00000471987 RAB33AQ14088 237 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 TBC1D10BQ4KMP7 808 aaPredicted RBP7.53□□□□□ -1.2
CD46-213ENST00000471987 PIP4K2CQ8TBX8 421 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 ZSWIM3Q96MP5 696 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 ZFYVE21Q9BQ24 234 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 JAM3Q9BX67 310 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 ARHGEF4Q9NR80 690 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 SMPD4Q9NXE4 827 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms