RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PRUNE2Q8WUY3 3088 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 ADCY6O43306 1168 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 FIBPO43427 364 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 DUSP11O75319 330 aaKnown RBP17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 TGFB3P10600 412 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 RARBP10826 455 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 PDCP20941 246 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 CIITAP33076 1130 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 USP11P51784 963 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 NKX3-2P78367 333 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 TNFAIP2Q03169 654 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 LRRC26Q2I0M4 334 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 CCDC62Q6P9F0 684 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 CDHR1Q96JP9 859 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 Q9Y3F1 56 aa17.02■□□□□ 0.32
CDC42SE1-203ENST00000470278 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 BTBD18B2RXH4 712 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 MAFGO15525 162 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 SMPD1P17405 629 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 ITGB5P18084 799 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 FOSBP53539 338 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 NR5A1Q13285 461 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 BECN1Q14457 450 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 CEP55Q53EZ4 464 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 NLRX1Q86UT6 975 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
CDC42SE1-203ENST00000470278 SYNRGQ9UMZ2 1314 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 SPATA31C2B4DYI2 1134 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 ARIH2O95376 493 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■□□□ 11.5
CDC42SE1-203ENST00000470278 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
CDC42SE1-203ENST00000470278 SEMA3FQ13275 785 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 MTMR1Q13613 665 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 MXRA8Q9BRK3 442 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 UPF3AQ9H1J1 476 aaKnown RBP17■□□□□ 0.31
CDC42SE1-203ENST00000470278 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
CDC42SE1-203ENST00000470278 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
CDC42SE1-203ENST00000470278 CDH23Q9H251 3354 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 CYP3A7-CYP3A51PA0A087WV96 503 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 FAM86B1E9PN63 330 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 MEIS1O00470 390 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 EDIL3O43854 480 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 ADAMTS4O75173 837 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 FAM86B2P0C5J1 330 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 TXNP10599 105 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 CYP3A7P24462 503 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 CST5P28325 142 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 GJA9P57773 515 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 EARS2Q5JPH6 523 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 TLK2Q86UE8 772 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 EMID1Q96A84 441 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 LENG1Q96BZ8 264 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 MBOAT7Q96N66 472 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 SENP7Q9BQF6 1050 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
CDC42SE1-203ENST00000470278 H3BQV1 296 aa16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 GCFC2P16383 781 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 UBA1P22314 1058 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 INF2Q27J81 1249 aa16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 PPP4R3AQ6IN85 833 aa16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 Q7L0L9 218 aa16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 LENG9Q96B70 501 aa16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
CDC42SE1-203ENST00000470278 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 GH1P01241 217 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 KCNA2P16389 499 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 ZNF76P36508 570 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 LRIT3Q3SXY7 679 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 Q4G0T1 1027 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 TMEM63BQ5T3F8 832 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 ANO1Q5XXA6 986 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 GIMAP8Q8ND71 665 aaPredicted RBP16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 CYP2W1Q8TAV3 490 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 SPC25Q9HBM1 224 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 KCNH7Q9NS40 1196 aa16.97■□□□□ 0.31
CDC42SE1-203ENST00000470278 FAM205CA6NFA0 338 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 DNM1LO00429 736 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 CTAGE5O15320 804 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 SYT1P21579 422 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms