RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FAM196BA6NMK8 535 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 E9PMD0 336 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 ZMYND10O75800 440 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 HNRNPH3P31942 346 aaKnown RBP18.77■□□□□ 0.6
ACTB-207ENST00000462494 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
ACTB-207ENST00000462494 EHHADHQ08426 723 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 RAD51AP2Q09MP3 1159 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 CCDC40Q4G0X9 1142 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
ACTB-207ENST00000462494 LRRIQ3A6PVS8 624 aaPredicted RBP18.77■□□□□ 0.59
ACTB-207ENST00000462494 TACC1O75410 805 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 MOCS3O95396 460 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 TNNT3P45378 269 aaPredicted RBP18.77■□□□□ 0.59
ACTB-207ENST00000462494 FAM26FQ5R3K3 315 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 TMC4Q7Z404 712 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 NELFCDQ8IXH7 590 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 TRIM58Q8NG06 486 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 TEKT1Q969V4 418 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 CAPN6Q9Y6Q1 641 aa18.77■□□□□ 0.59
ACTB-207ENST00000462494 ABCB11O95342 1321 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 NPHP3-ACAD11A0A0J9YXS1 232 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 KLRG2A4D1S0 409 aaPredicted RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 PDE2AO00408 941 aaPredicted RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 LMAN1P49257 510 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 CACNB3P54284 484 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 C2orf54Q08AI8 447 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 TCP10Q12799 353 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 RPGRIP1Q96KN7 1286 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 FGFBP2Q9BYJ0 223 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 SH2D4AQ9H788 454 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 COL4A3BPQ9Y5P4 624 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 MYH7BA7E2Y1 1941 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 PHACTR2O75167 634 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 GCFC2P16383 781 aaKnown RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 FKBP3Q00688 224 aaKnown RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 HSP90B2PQ58FF3 399 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
ACTB-207ENST00000462494 NT5C3AQ9H0P0 336 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 NLRC4Q9NPP4 1024 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 JRKLQ9Y4A0 524 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 PCDHA1Q9Y5I3 950 aa18.76■□□□□ 0.59
ACTB-207ENST00000462494 POTEB3A0JP26 581 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 POTECB2RU33 542 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 MCM3P25205 808 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 HNRNPH2P55795 449 aaKnown RBP18.75■□□□□ 0.59
ACTB-207ENST00000462494 QRICH1Q2TAL8 776 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 POTEBQ6S5H4 581 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 ANKRD13CQ8N6S4 541 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 BAP1Q92560 729 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 ZHX3Q9H4I2 956 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 FAN1Q9Y2M0 1017 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 KDM3AQ9Y4C1 1321 aa18.75■□□□□ 0.59
ACTB-207ENST00000462494 PLA2G4BP0C869 781 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 STAT3P40763 770 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 SLC1A4P43007 532 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 GFPT1Q06210 699 aaPredicted RBP18.74■□□□□ 0.59
ACTB-207ENST00000462494 TDRD12Q587J7 1177 aaKnown RBP18.74■□□□□ 0.59
ACTB-207ENST00000462494 GPBP1Q86WP2 473 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 PROM2Q8N271 834 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 GDAP1L1Q96MZ0 367 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 PSMB7Q99436 277 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 HINFPQ9BQA5 517 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
ACTB-207ENST00000462494 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 MAGEA1P43355 309 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 KCNMA1Q12791 1236 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 SEPT2Q15019 361 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
ACTB-207ENST00000462494 SLC27A3Q5K4L6 730 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 PDXDC1Q6P996 788 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 CCDC65Q8IXS2 484 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 EXOC4Q96A65 974 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 MTMR8Q96EF0 704 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 ACBD3Q9H3P7 528 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 SNX12Q9UMY4 172 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 AFF2P51816 1311 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
ACTB-207ENST00000462494 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 KRT18P05783 430 aaKnown RBP18.73■□□□□ 0.59
ACTB-207ENST00000462494 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
ACTB-207ENST00000462494 MAP9Q49MG5 647 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 ZCWPW2Q504Y3 356 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 IQCEQ6IPM2 695 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 HHIPL2Q6UWX4 724 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 GSPT2Q8IYD1 628 aaKnown RBP18.73■□□□□ 0.59
ACTB-207ENST00000462494 MSL3Q8N5Y2 521 aaKnown RBP18.73■□□□□ 0.59
ACTB-207ENST00000462494 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 PCDHAC2Q9Y5I4 1007 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 TARSL2A2RTX5 802 aaKnown RBP18.73■□□□□ 0.59
ACTB-207ENST00000462494 TRIM37O94972 964 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 CXCR5P32302 372 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 CRKP46108 304 aa18.73■□□□□ 0.59
ACTB-207ENST00000462494 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.599e-7■■■□□ 17.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms