RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 BAP1Q92560 729 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 PACSIN2Q9UNF0 486 aaPredicted RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 FAM205AQ6ZU69 1335 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 C5orf60A6NFR6 353 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 ZNF844Q08AG5 666 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 UAP1Q16222 522 aaPredicted RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 ODF2Q5BJF6 829 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 CCDC47Q96A33 483 aaKnown RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 INPP4AQ96PE3 977 aaPredicted RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 RPSAP08865 295 aaKnown RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 RASGRP4Q8TDF6 673 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 RAPGEF5Q92565 580 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 CCSER1Q9C0I3 900 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 ISCUQ9H1K1 167 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 CNOT8Q9UFF9 292 aaKnown RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 MGRN1O60291 552 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 ERCC3P19447 782 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 ERVK-9P63128 1117 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 ASIC1P78348 528 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 PFKFB3Q16875 520 aaPredicted RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 TDRD12Q587J7 1177 aaKnown RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 BLIDQ8IZY5 108 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 TBC1D22AQ8WUA7 517 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 HVCN1Q96D96 273 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 TRIM9Q9C026 710 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 TRIM6Q9C030 488 aaPredicted RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 SEMA6BQ9H3T3 888 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 SLC24A3Q9HC58 644 aa18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.61
SCUBE2-202ENST00000450649 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 ORC4O43929 436 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 PPP1R12BO60237 982 aaPredicted RBP18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 RTN2O75298 545 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 NTSR2O95665 410 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 MYBP10242 640 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 ECHS1P30084 290 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 PPP2R2AP63151 447 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 TNNC1P63316 161 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 BIRC3Q13489 604 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 CCDC84Q86UT8 332 aaPredicted RBP18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 FMNL3Q8IVF7 1028 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 HPS3Q969F9 1004 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 GBP2P32456 591 aaPredicted RBP18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 GYG1P46976 350 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 EHHADHQ08426 723 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 PDXDC1Q6P996 788 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 INTS5Q6P9B9 1019 aaKnown RBP18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 CCT6BQ92526 530 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 TATDN2Q93075 761 aa18.88■□□□□ 0.61
SCUBE2-202ENST00000450649 SSU72P8A0A1W2PR75 194 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 USP17L21D6R901 530 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 PLCG1P19174 1290 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 NAA25Q14CX7 972 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 GKAP1Q5VSY0 366 aaPredicted RBP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 HGSNATQ68CP4 663 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 RUFY4Q6ZNE9 571 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 USP38Q8NB14 1042 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 BTG4Q9NY30 223 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 COL1A1P02452 1464 aaPredicted RBP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 PHF20L1A8MW92 1017 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 CAMTA2O94983 1202 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 MEI1Q5TIA1 1274 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 CACNA2D4Q7Z3S7 1137 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 CCDC87Q9NVE4 849 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 DNAJC8O75937 253 aaPredicted RBP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 CALML3P27482 149 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 UBE4AQ14139 1066 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 MAN2A1Q16706 1144 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 ARMC9Q7Z3E5 817 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 CPLX4Q7Z7G2 160 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 DDX42Q86XP3 938 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 LRRC45Q96CN5 670 aa18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 NOVA2Q9UNW9 492 aaKnown RBP18.87■□□□□ 0.61
SCUBE2-202ENST00000450649 PAEPP09466 180 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 KLRC1P26715 233 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 PPP1R2P41236 205 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 ELF3P78545 371 aaPredicted RBP18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 NAB2Q15742 525 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 ACCSLQ4AC99 568 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 TAX1BP1Q86VP1 789 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 KIAA0895Q8NCT3 520 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 ZNF384Q8TF68 577 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 P3H4Q92791 437 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 TBC1D31Q96DN5 1066 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 RBAK-RBAKDNI3L0D1 243 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 ATP6V1G2O95670 118 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 KDM4CQ9H3R0 1056 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 NOD2Q9HC29 1040 aa18.86■□□□□ 0.61
SCUBE2-202ENST00000450649 BAZ2AQ9UIF9 1905 aaKnown RBP18.85■□□□□ 0.61
SCUBE2-202ENST00000450649 CENPPQ6IPU0 288 aa18.85■□□□□ 0.61
SCUBE2-202ENST00000450649 EIF1ADQ8N9N8 165 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms