RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 RHBDL3P58872 404 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RING1Q06587 406 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 SMC1AQ14683 1233 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLCB4Q15147 1175 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CLPPQ16740 277 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RSPO4Q2I0M5 234 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 KIF4BQ2VIQ3 1234 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 HSP90AB2PQ58FF8 381 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC158Q5M9N0 1113 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 FOXB2Q5VYV0 432 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 MTHFD1LQ6UB35 978 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLA2G4DQ86XP0 818 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 APLFQ8IW19 511 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 IQCF2Q8IXL9 164 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ELOA2Q8IYF1 753 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 IL22RA1Q8N6P7 574 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 MIGA1Q8NAN2 632 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 SMYD1Q8NB12 490 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 KLHDC4Q8TBB5 520 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CHAC2Q8WUX2 184 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 EZH1Q92800 747 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 GTF3C6Q969F1 213 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 KISS1RQ969F8 398 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC35B4Q969S0 331 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 TEKT1Q969V4 418 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ELMO3Q96BJ8 720 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 WDR89Q96FK6 387 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CABS1Q96KC9 395 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RMDN2Q96LZ7 410 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 YIPF2Q9BWQ6 316 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 FUT8Q9BYC5 575 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 TPSG1Q9NRR2 321 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 HOMER2Q9NSB8 354 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 QPCTLQ9NXS2 382 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ORC3Q9UBD5 711 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADAM30Q9UKF2 790 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF214Q9UL59 606 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 THRAP3Q9Y2W1 955 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CTDP1Q9Y5B0 961 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 TCHHQ07283 1943 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 RPGRIP1LQ68CZ1 1315 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 ABCC11Q96J66 1382 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CPSF1Q10570 1443 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 NRXN1Q9ULB1 1477 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 COL17A1Q9UMD9 1497 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 CDK13Q14004 1512 aaKnown RBP4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 EFCAB6Q5THR3 1501 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 LMTK2Q8IWU2 1503 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 HECW2Q9P2P5 1572 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 TRPM1Q7Z4N2 1603 aa4.1□□□□□ -1.75
HMGB3P8-201ENST00000449709 DCDC2CA8MYV0 355 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 LINC01387J3KSC0 135 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 IPO5O00410 1097 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 TM4SF5O14894 197 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLD2O14939 933 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 TPD52L2O43399 206 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 TIMM44O43615 452 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 TADA3O75528 432 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 RASSF9O75901 435 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ERLIN2O94905 339 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 PGRP06401 933 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 NID1P14543 1247 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 YY1P25490 414 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CNGA1P29973 690 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 RDXP35241 583 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 AMPHP49418 695 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 MNAT1P51948 309 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZBED6P86452 979 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 EXOSC10Q01780 885 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ROR2Q01974 943 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 GRIK4Q16099 956 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 GNPTABQ3T906 1256 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 FNDC3BQ53EP0 1204 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 NKAPLQ5M9Q1 402 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZMYM1Q5SVZ6 1142 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ODR4Q5SWX8 454 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZKSCAN2Q63HK3 967 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CWF19L1Q69YN2 538 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 MCTP1Q6DN14 999 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 C20orf204Q6ZNR8 217 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 YTHDF3Q7Z739 585 aaKnown RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 KIAA1328Q86T90 577 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 RNF180Q86T96 592 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 C12orf40Q86WS4 652 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ANKRD13BQ86YJ7 626 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYLK4Q86YV6 388 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC170Q8IYT3 715 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 MYOCDQ8IZQ8 938 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 FAM81AQ8TBF8 368 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 PARD3BQ8TEW8 1205 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 JDP2Q8WYK2 163 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ARHGAP45Q92619 1136 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 N4BP2L2Q92802 583 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 ACSF2Q96CM8 615 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 DDX11Q96FC9 970 aa4.09□□□□□ -1.75
HMGB3P8-201ENST00000449709 EXOC2Q96KP1 924 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms