RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ANKS1AQ92625 1134 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 CCDC8Q9H0W5 538 aaPredicted RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 ALG13Q9NP73 1137 aaKnown RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 PDGFCQ9NRA1 345 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 TLR7Q9NYK1 1049 aaKnown RBP8.75□□□□□ -1.01
RBM39-218ENST00000449489 ATRXP46100 2492 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 ZNF532Q9HCE3 1301 aa8.75□□□□□ -1.01
RBM39-218ENST00000449489 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 NKRFO15226 690 aaKnown RBP eCLIP8.74□□□□□ -1.01
RBM39-218ENST00000449489 DEFB103AP81534 67 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 HTRA4P83105 476 aaPredicted RBP8.74□□□□□ -1.01
RBM39-218ENST00000449489 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 KIAA1211Q6ZU35 1233 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 NYAP1Q6ZVC0 841 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 SESTD1Q86VW0 696 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 RNF135Q8IUD6 432 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 SUGP1Q8IWZ8 645 aaKnown RBP8.74□□□□□ -1.01
RBM39-218ENST00000449489 GMCL1P1Q8NEA9 526 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 KIFC2Q96AC6 838 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 PBXIP1Q96AQ6 731 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 NUP88Q99567 741 aaPredicted RBP8.74□□□□□ -1.01
RBM39-218ENST00000449489 PCDHGC3Q9UN70 934 aa8.74□□□□□ -1.01
RBM39-218ENST00000449489 KMT2EQ8IZD2 1858 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 IGKV6D-41A0A0C4DH26 115 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 TMEM221A6NGB7 291 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 H3BNC9 293 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 M0R296 226 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 IPO8O15397 1037 aaKnown RBP8.73□□□□□ -1.01
RBM39-218ENST00000449489 TRAK2O60296 914 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 PLA2G6O60733 806 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 NR1I2O75469 434 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 SELPP16109 830 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 LTBRP36941 435 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 RARSP54136 660 aaKnown RBP8.73□□□□□ -1.01
RBM39-218ENST00000449489 IKBKEQ14164 716 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 RETREG3Q86VR2 466 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 FBXO16Q8IX29 292 aaPredicted RBP8.73□□□□□ -1.01
RBM39-218ENST00000449489 FBXL6Q8N531 539 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 WDR11Q9BZH6 1224 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 NSUN3Q9H649 340 aaKnown RBP8.73□□□□□ -1.01
RBM39-218ENST00000449489 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 CYP39A1Q9NYL5 469 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 MUTYHQ9UIF7 546 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 MTUS1Q9ULD2 1270 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 BAHCC1Q9P281 2608 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 RAD50Q92878 1312 aa8.73□□□□□ -1.01
RBM39-218ENST00000449489 COL4A6Q14031 1691 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 MYL3P08590 195 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 PTGS1P23219 599 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 EPC2Q52LR7 807 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 SBK1Q52WX2 424 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 TCEAL5Q5H9L2 206 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 FAM47CQ5HY64 1035 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 TMEM63BQ5T3F8 832 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 CTR9Q6PD62 1173 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 FAM160B2Q86V87 743 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 CHURC1Q8WUH1 139 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 CLUAP1Q96AJ1 413 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 C17orf80Q9BSJ5 609 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 ARMT1Q9H993 441 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
RBM39-218ENST00000449489 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 LCTP09848 1927 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 PKD1L2Q7Z442 2459 aa8.72□□□□□ -1.01
RBM39-218ENST00000449489 CYP2D7A0A087X1C5 515 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 MBTPS2O43462 519 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 PRKAB2O43741 272 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 NBNO60934 754 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 BMP3P12645 472 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 RASA1P20936 1047 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 ADD2P35612 726 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 STAT2P52630 851 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 ZXDAP98168 799 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 SMAD4Q13485 552 aaKnown RBP8.71□□□□□ -1.02
RBM39-218ENST00000449489 CBX2Q14781 532 aaPredicted RBP8.71□□□□□ -1.02
RBM39-218ENST00000449489 PTGISQ16647 500 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 DESI1Q6ICB0 168 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 EEPD1Q7L9B9 569 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 TMCO2Q7Z6W1 182 aaPredicted RBP8.71□□□□□ -1.02
RBM39-218ENST00000449489 ERC1Q8IUD2 1116 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
RBM39-218ENST00000449489 OR6J1Q8NGC5 347 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 CRBNQ96SW2 442 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 LMAN2LQ9H0V9 348 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 HOMER2Q9NSB8 354 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 ARPP21Q9UBL0 812 aaPredicted RBP8.71□□□□□ -1.02
RBM39-218ENST00000449489 CLIP2Q9UDT6 1046 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
RBM39-218ENST00000449489 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
RBM39-218ENST00000449489 STXBP3O00186 592 aa8.7□□□□□ -1.02
RBM39-218ENST00000449489 MBD4O95243 580 aa8.7□□□□□ -1.02
RBM39-218ENST00000449489 EYA4O95677 639 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms