RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CGREF1Q99674 301 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 INTUQ9ULD6 942 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CCDC162PA2VCL2 907 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 BACH1O14867 736 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 PEX11AO75192 247 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 TCF7P36402 384 aaPredicted RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 SERPINB8P50452 374 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 WASHC4Q2M389 1173 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 PARP6Q2NL67 630 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 FAM153CQ494X1 144 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 METTL16Q86W50 562 aaKnown RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 NEK1Q96PY6 1258 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 MAK16Q9BXY0 300 aaKnown RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 IL1RAPL1Q9NZN1 696 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 NFU1Q9UMS0 254 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 LUC7L2Q9Y383 392 aaKnown RBP11.73□□□□□ -0.53
LINC00342-202ENST00000448494 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
LINC00342-202ENST00000448494 H0YGN5 161 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 NDUFB5O43674 189 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 TCP1P17987 556 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 GUCY2FP51841 1108 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 CCDC153Q494R4 210 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 CCDC152Q4G0S7 254 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 EFCAB2Q5VUJ9 269 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 MAP7D3Q8IWC1 876 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 DDX12PQ92771 950 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 PURBQ96QR8 312 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 SAMSN1Q9NSI8 373 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 ZNF180Q9UJW8 692 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 NFS1Q9Y697 457 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 MROH7-TTC4A0A0A0MT08 1334 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 NVLO15381 856 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 LMNAP02545 664 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 CARSP49589 748 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 ADARP55265 1226 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 CDK17Q00537 523 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 SPIDRQ14159 915 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 FAAH2Q6GMR7 532 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 CCNJLQ8IV13 435 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 FAM114A2Q9NRY5 505 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 EXOC1Q9NV70 894 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 ETNK2Q9NVF9 386 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 RPL26L1Q9UNX3 145 aaKnown RBP11.72□□□□□ -0.53
LINC00342-202ENST00000448494 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
LINC00342-202ENST00000448494 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 PTDSS1P48651 473 aaKnown RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 ACADVLP49748 655 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 PLCD1P51178 756 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 PMS2P54278 862 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 HERVK_113P62684 666 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 OCRLQ01968 901 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 ZNF844Q08AG5 666 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 LIN52Q52LA3 116 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 CFAP70Q5T0N1 1121 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 SYT2Q8N9I0 419 aaPredicted RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 SSH3Q8TE77 659 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 TAF4BQ92750 862 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 ATP6V0A1Q93050 837 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 EVI5LQ96CN4 794 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 LRRC45Q96CN5 670 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 CLIP3Q96DZ5 547 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 CCDC134Q9H6E4 229 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 KIAA1522Q9P206 1035 aaPredicted RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
LINC00342-202ENST00000448494 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 ADGRB3O60242 1522 aa11.71□□□□□ -0.53
LINC00342-202ENST00000448494 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms