RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 GLIS3Q8NEA6 775 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 PANX2Q96RD6 677 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 VAV3Q9UKW4 847 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
SMC6-206ENST00000446852 SLC26A4O43511 780 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 MFAP3LO75121 409 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 SSBP05455 408 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMC6-206ENST00000446852 PLA2G4BP0C869 781 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 GTF2F1P35269 517 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMC6-206ENST00000446852 FXR1P51114 621 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMC6-206ENST00000446852 NBPF12Q5TAG4 269 aaPredicted RBP19.47■□□□□ 0.71
SMC6-206ENST00000446852 CENPPQ6IPU0 288 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 CATSPER3Q86XQ3 398 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 NOC3LQ8WTT2 800 aaKnown RBP19.47■□□□□ 0.71
SMC6-206ENST00000446852 ZNF592Q92610 1267 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 ZNF536O15090 1300 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 ZNF76P36508 570 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 UBXN2AP68543 259 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 AGBL1Q96MI9 1066 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 ABCB11O95342 1321 aa19.47■□□□□ 0.71
SMC6-206ENST00000446852 DICER1Q9UPY3 1922 aaKnown RBP19.47■□□□□ 0.71
SMC6-206ENST00000446852 LGALS16A8MUM7 142 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 CTNND1O60716 968 aaKnown RBP19.46■□□□□ 0.71
SMC6-206ENST00000446852 SPATA31C1P0DKV0 1188 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 UBXN1Q04323 297 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 COASYQ13057 564 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 HAUS3Q68CZ6 603 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
SMC6-206ENST00000446852 KIAA1683Q9H0B3 1180 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 WDR46O15213 610 aaKnown RBP19.46■□□□□ 0.71
SMC6-206ENST00000446852 TOGARAM2Q6ZUX3 1019 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 REXO1L1PQ8IX06 675 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 ZNF507Q8TCN5 953 aa19.46■□□□□ 0.71
SMC6-206ENST00000446852 NPHP3-ACAD11A0A0J9YXS1 232 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 RNF225M0QZC1 329 aaPredicted RBP19.45■□□□□ 0.7
SMC6-206ENST00000446852 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.75e-6■□□□□ 8.5
SMC6-206ENST00000446852 PSMC6P62333 389 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 GPBP1Q86WP2 473 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 CNOT6LQ96LI5 555 aaKnown RBP19.45■□□□□ 0.7
SMC6-206ENST00000446852 MAGEC2Q9UBF1 373 aaPredicted RBP19.45■□□□□ 0.7
SMC6-206ENST00000446852 PAXBP1Q9Y5B6 917 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 DYNC1I1O14576 645 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 ICAM1P05362 532 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 CYP11B2P19099 503 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 RPA1P27694 616 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 SLC12A3P55017 1021 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 PSMD2Q13200 908 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 LRRC41Q15345 812 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 SLC30A10Q6XR72 485 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 TSC1Q92574 1164 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 LPAR1Q92633 364 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 SLF1Q9BQI6 1058 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 TUBGCP2Q9BSJ2 902 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 PANK4Q9NVE7 773 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 CCPG1Q9ULG6 757 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 PPP2R2CQ9Y2T4 447 aa19.45■□□□□ 0.7
SMC6-206ENST00000446852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.45■□□□□ 0.75e-7■■□□□ 12.2
SMC6-206ENST00000446852 CACNB1Q02641 598 aaPredicted RBP19.44■□□□□ 0.7
SMC6-206ENST00000446852 MTF1Q14872 753 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 ARSHQ5FYA8 562 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 MB21D1Q8N884 522 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 PRPF38AQ8NAV1 312 aaKnown RBP19.44■□□□□ 0.7
SMC6-206ENST00000446852 ERMNQ8TAM6 284 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 FGFBP2Q9BYJ0 223 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 PHIPQ8WWQ0 1821 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 SOWAHDA6NJG2 315 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 EML1O00423 815 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 MEIS1O00470 390 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 CNGA4Q8IV77 575 aa19.44■□□□□ 0.7
SMC6-206ENST00000446852 ZFP91Q96JP5 570 aaPredicted RBP19.44■□□□□ 0.7
SMC6-206ENST00000446852 CCP110O43303 1012 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
SMC6-206ENST00000446852 RAD51AP2Q09MP3 1159 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 MTMR2Q13614 643 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 GINM1Q9NU53 330 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 POLR2AP24928 1970 aaKnown RBP19.43■□□□□ 0.7
SMC6-206ENST00000446852 B4DLN1 442 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 KIF2AO00139 706 aaPredicted RBP19.43■□□□□ 0.7
SMC6-206ENST00000446852 CYP4A11Q02928 519 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 FAM26FQ5R3K3 315 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
SMC6-206ENST00000446852 PRAMEF18Q5VWM3 479 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 BMP2KQ9NSY1 1161 aaPredicted RBP19.43■□□□□ 0.7
SMC6-206ENST00000446852 PCDHA2Q9Y5H9 948 aa19.43■□□□□ 0.7
SMC6-206ENST00000446852 SBF1O95248 1867 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 COL11A1P12107 1806 aaPredicted RBP19.42■□□□□ 0.7
SMC6-206ENST00000446852 RLFQ13129 1914 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 A0A1W2PQC6 194 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 PES1O00541 588 aaKnown RBP19.42■□□□□ 0.7
SMC6-206ENST00000446852 NFIBO00712 420 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 VCAM1P19320 739 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 HSD17B4P51659 736 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 TRPM4Q8TD43 1214 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 DESI2Q9BSY9 194 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 EMILIN3Q9NT22 766 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms