RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 EMC4Q5J8M3 183 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 CDCA2Q69YH5 1023 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 PRR23BQ6ZRT6 265 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 CABP7Q86V35 215 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 THNSL2Q86YJ6 484 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 SH3RF2Q8TEC5 729 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 CELF4Q9BZC1 486 aaKnown RBP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 TRAF5O00463 557 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 DGKIO75912 1065 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 GLRX3O76003 335 aaKnown RBP6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 JMJD7P0C870 316 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 GNAT1P11488 350 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 CANXP27824 592 aaKnown RBP6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 DNM2P50570 870 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 LACTBP83111 547 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 PRR5P85299 388 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 OSTM1Q86WC4 334 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 DIRC2Q96SL1 478 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 SAMD15Q9P1V8 674 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
HMGB3P6-201ENST00000444896 B4E1Z4 1266 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 HGSO14964 777 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 PDE8AO60658 829 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 FARP2O94887 1054 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 NPTXRO95502 500 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 PDE6AP16499 860 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 VIPR1P32241 457 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 JAM2P57087 298 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 PLEKHN1Q494U1 663 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 PIK3R6Q5UE93 754 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 STEAP3Q658P3 488 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 RNF180Q86T96 592 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 DCP2Q8IU60 420 aaKnown RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 SEC14L1Q92503 715 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 PEX11GQ96HA9 241 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 SMURF1Q9HCE7 757 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 CATSPERZQ9NTU4 200 aa6.51□□□□□ -1.37
HMGB3P6-201ENST00000444896 MYOCOSA0A1B0GUC4 107 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 M0R2C6 588 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 HRKO00198 91 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 SLC27A2O14975 620 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 GSTA4O15217 222 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 VIL1P09327 827 aaKnown RBP6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 ST5P78524 1137 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 GPR19Q15760 415 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 CFAP100Q494V2 611 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 FAM47CQ5HY64 1035 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 ARHGAP36Q6ZRI8 547 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZNF605Q86T29 641 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 DDX53Q86TM3 631 aaKnown RBP6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 RBM12BQ8IXT5 1001 aaKnown RBP6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 UHMK1Q8TAS1 419 aaKnown RBP6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 TSPAN17Q96FV3 270 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 WNK4Q96J92 1243 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 ORAI3Q9BRQ5 295 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 EPB41L4BQ9H329 900 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 SMOC1Q9H4F8 434 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 BCAS3Q9H6U6 928 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 IFT57Q9NWB7 429 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 PALD1Q9ULE6 856 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 TELO2Q9Y4R8 837 aa6.5□□□□□ -1.37
HMGB3P6-201ENST00000444896 TCRBV5S2A0A599 114 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 ABLIM1O14639 778 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 KPNA6O60684 536 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZBTB7AO95365 584 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 STAT3P40763 770 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 NEK4P51957 841 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 SEPT7Q16181 437 aaKnown RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 CRY1Q16526 586 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 TAF7LQ5H9L4 462 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 TMEM132EQ6IEE7 984 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 CYP4F22Q6NT55 531 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 ZC3H14Q6PJT7 736 aaKnown RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 KRT26Q7Z3Y9 468 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 MILR1Q7Z6M3 343 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 CISD2Q8N5K1 135 aaKnown RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 CLEC4DQ8WXI8 215 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 MCOLN1Q9GZU1 580 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 DCP1AQ9NPI6 582 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 ASH2LQ9UBL3 628 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 DSEQ9UL01 958 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 MAPRE3Q9UPY8 281 aa6.49□□□□□ -1.37
HMGB3P6-201ENST00000444896 CBX4O00257 560 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 KRIT1O00522 736 aa6.48□□□□□ -1.37
HMGB3P6-201ENST00000444896 MAN2B1O00754 1011 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms