RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 MRPS9P82933 396 aaKnown RBP20.24■□□□□ 0.83
CCDC188-201ENST00000439765 LY6KQ17RY6 165 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 CCDC62Q6P9F0 684 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 DEFB123Q8N688 67 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 CCDC12Q8WUD4 166 aaPredicted RBP20.24■□□□□ 0.83
CCDC188-201ENST00000439765 GTF3C6Q969F1 213 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 SCN10AQ9Y5Y9 1956 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 CDKL5O76039 1030 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 ITGB8P26012 769 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 CDK7P50613 346 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 FAAP100Q0VG06 881 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 RTEL1Q9NZ71 1219 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 PCDHA6Q9UN73 950 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 Q9Y3F1 56 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 PCDHA8Q9Y5H6 950 aa20.24■□□□□ 0.83
CCDC188-201ENST00000439765 ESYT2A0FGR8 921 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 DCDC2CA8MYV0 355 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 ADAMTS3O15072 1205 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC188-201ENST00000439765 SORBS3O60504 671 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 DEXIO95424 95 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 SHHQ15465 462 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 C9orf50Q5SZB4 431 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 PCNX4Q63HM2 1172 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 HSCBQ8IWL3 235 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
CCDC188-201ENST00000439765 AIFM3Q96NN9 605 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 ANO3Q9BYT9 981 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 ZMYND12Q9H0C1 365 aa20.23■□□□□ 0.83
CCDC188-201ENST00000439765 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
CCDC188-201ENST00000439765 CTDNEP1O95476 244 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 RAG1P15918 1043 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 FAM109BQ6ICB4 259 aaPredicted RBP20.22■□□□□ 0.83
CCDC188-201ENST00000439765 CXCL17Q6UXB2 119 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 Q7L0L9 218 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
CCDC188-201ENST00000439765 GLT8D2Q9H1C3 349 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 C6orf50Q9HD87 102 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 TMEM39AQ9NV64 488 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 DDX41Q9UJV9 622 aaKnown RBP20.22■□□□□ 0.83
CCDC188-201ENST00000439765 TBX21Q9UL17 535 aa20.22■□□□□ 0.83
CCDC188-201ENST00000439765 STK36Q9NRP7 1315 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
CCDC188-201ENST00000439765 ARVCFO00192 962 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 UBA1P22314 1058 aaKnown RBP20.21■□□□□ 0.83
CCDC188-201ENST00000439765 CLK2P49760 499 aaKnown RBP20.21■□□□□ 0.83
CCDC188-201ENST00000439765 CPT1AP50416 773 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 ARHGAP1Q07960 439 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 JAKMIP3Q5VZ66 844 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 RASGRP4Q8TDF6 673 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 INPP4AQ96PE3 977 aaPredicted RBP20.21■□□□□ 0.83
CCDC188-201ENST00000439765 EHMT1Q9H9B1 1298 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 MTMR10Q9NXD2 777 aa20.21■□□□□ 0.83
CCDC188-201ENST00000439765 STAM2O75886 525 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 CABYRO75952 493 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 GH1P01241 217 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 AP3B2Q13367 1082 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 BECN1Q14457 450 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 GNPTABQ3T906 1256 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 VTI1AQ96AJ9 217 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 TMX3Q96JJ7 454 aa20.2■□□□□ 0.82
CCDC188-201ENST00000439765 ZEB2O60315 1214 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 GNA11P29992 359 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 NLRP5P59047 1200 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 XRRA1Q6P2D8 792 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 AFG1LQ8WV93 481 aa20.19■□□□□ 0.82
CCDC188-201ENST00000439765 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
CCDC188-201ENST00000439765 FIBPO43427 364 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 GGPS1O95749 300 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 FOSP01100 380 aaPredicted RBP20.18■□□□□ 0.82
CCDC188-201ENST00000439765 MYL3P08590 195 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SP2Q02086 613 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 FPGSQ05932 587 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SEMA3FQ13275 785 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
CCDC188-201ENST00000439765 KCNV1Q6PIU1 500 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SLC43A3Q8NBI5 491 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SH3GLB2Q9NR46 395 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 ORC3Q9UBD5 711 aaPredicted RBP20.18■□□□□ 0.82
CCDC188-201ENST00000439765 GBF1Q92538 1859 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 JAK2O60674 1132 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 TIMP1P01033 207 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 MMP3P08254 477 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 ITGB5P18084 799 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SREBF1P36956 1147 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 EPHB4P54760 987 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 CCDC83Q8IWF9 413 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 DHX37Q8IY37 1157 aaKnown RBP20.18■□□□□ 0.82
CCDC188-201ENST00000439765 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
CCDC188-201ENST00000439765 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 SEZ6LQ9BYH1 1024 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 STXBP5LQ9Y2K9 1186 aa20.18■□□□□ 0.82
CCDC188-201ENST00000439765 TRIP12Q14669 1992 aaPredicted RBP20.17■□□□□ 0.82
CCDC188-201ENST00000439765 A6NJR5 290 aa20.17■□□□□ 0.82
CCDC188-201ENST00000439765 TGFB3P10600 412 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms