RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PTGS1P23219 599 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 IRX5P78411 483 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-206ENST00000439717 BEX3Q00994 111 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 DHX37Q8IY37 1157 aaKnown RBP13.5□□□□□ -0.25
HSPG2-206ENST00000439717 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-206ENST00000439717 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 ALG1Q9BT22 464 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 JADE2Q9NQC1 790 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 STARD7Q9NQZ5 370 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 NR2E3Q9Y5X4 410 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 UBIAD1Q9Y5Z9 338 aa13.5□□□□□ -0.25
HSPG2-206ENST00000439717 CYP3A4P08684 503 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 ITGB5P18084 799 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
HSPG2-206ENST00000439717 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-206ENST00000439717 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 NEDD9Q14511 834 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 CELF3Q5SZQ8 465 aaKnown RBP13.49□□□□□ -0.25
HSPG2-206ENST00000439717 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 CCDC83Q8IWF9 413 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-206ENST00000439717 PPTC7Q8NI37 304 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 PGBD1Q96JS3 809 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 MXRA8Q9BRK3 442 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 PHF20Q9BVI0 1012 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
HSPG2-206ENST00000439717 M0R2N6 131 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 JAK2O60674 1132 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 GGPS1O95749 300 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 MMP3P08254 477 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 HMGN5P82970 282 aaKnown RBP13.48□□□□□ -0.25
HSPG2-206ENST00000439717 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
HSPG2-206ENST00000439717 SP2Q02086 613 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 MTMR1Q13613 665 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 NPY5RQ15761 445 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 CEP55Q53EZ4 464 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 NIPA1Q7RTP0 329 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 MTG1Q9BT17 334 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-206ENST00000439717 MLXIPQ9HAP2 919 aa13.48□□□□□ -0.25
HSPG2-206ENST00000439717 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-206ENST00000439717 MEIS1O00470 390 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 MYL3P08590 195 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 ZNF76P36508 570 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 USP11P51784 963 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 RTP1P59025 263 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 DGKDQ16760 1214 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 VTI1AQ96AJ9 217 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 SPATA33Q96N06 139 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
HSPG2-206ENST00000439717 MROH7Q68CQ1 1323 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 ARVCFO00192 962 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 PPFIA4O75335 1185 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
HSPG2-206ENST00000439717 HOXD8P13378 290 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-206ENST00000439717 KCNA2P16389 499 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 CIITAP33076 1130 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 CDK7P50613 346 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 TRIM29Q14134 588 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 ANKRD33Q7Z3H0 272 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 TOX2Q96NM4 488 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 KCNH7Q9NS40 1196 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 ATP11BQ9Y2G3 1177 aa13.46□□□□□ -0.25
HSPG2-206ENST00000439717 DTNBO60941 627 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 ATP9AO75110 1047 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 KRT2P35908 639 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-206ENST00000439717 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
HSPG2-206ENST00000439717 CYFIP1Q7L576 1253 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 CYP2W1Q8TAV3 490 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
HSPG2-206ENST00000439717 GJB4Q9NTQ9 266 aa13.45□□□□□ -0.26
HSPG2-206ENST00000439717 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 NFASCO94856 1347 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 NOP56O00567 594 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms