RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PIBF1Q8WXW3 757 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 BCAS3Q9H6U6 928 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 ATG2AQ2TAZ0 1938 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 LOXHD1Q8IVV2 1947 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 XIRP2A4UGR9 3374 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 SGSM2O43147 1006 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 NBNO60934 754 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 GGPS1O95749 300 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 UBA1P22314 1058 aaKnown RBP21.08■□□□□ 0.97
GTF3A-204ENST00000438571 DEFB103AP81534 67 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 TROAPQ12815 778 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 TRDNQ13061 729 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 WTAPQ15007 396 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 KIAA0753Q2KHM9 967 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 FCHSD1Q86WN1 690 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 HERC6Q8IVU3 1022 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 AFAP1L1Q8TED9 768 aa21.08■□□□□ 0.97
GTF3A-204ENST00000438571 U3KPZ7 1027 aaPredicted RBP21.08■□□□□ 0.97
GTF3A-204ENST00000438571 CKBP12277 381 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 WDR5P61964 334 aaKnown RBP21.07■□□□□ 0.96
GTF3A-204ENST00000438571 TAP1Q03518 808 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 RBL2Q08999 1139 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 TRIM71Q2Q1W2 868 aaKnown RBP21.07■□□□□ 0.96
GTF3A-204ENST00000438571 MYSM1Q5VVJ2 828 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 TRAF7Q6Q0C0 670 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 RALYLQ86SE5 291 aaKnown RBP21.07■□□□□ 0.96
GTF3A-204ENST00000438571 VSIG10LQ86VR7 867 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
GTF3A-204ENST00000438571 SYMPKQ92797 1274 aaKnown RBP21.07■□□□□ 0.96
GTF3A-204ENST00000438571 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
GTF3A-204ENST00000438571 BRWD1Q9NSI6 2320 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 LCHNA4D1U4 455 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 HOXD8P13378 290 aaPredicted RBP21.06■□□□□ 0.96
GTF3A-204ENST00000438571 SELPP16109 830 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
GTF3A-204ENST00000438571 CCDC155Q8N6L0 562 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 C7orf31Q8N865 590 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 NCOA7Q8NI08 942 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 RUFY2Q8WXA3 655 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 TELO2Q9Y4R8 837 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 NCOR1O75376 2440 aa21.06■□□□□ 0.96
GTF3A-204ENST00000438571 MBTPS1Q14703 1052 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 PHOSPHO2Q8TCD6 241 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 ATXN2LQ8WWM7 1075 aaKnown RBP21.05■□□□□ 0.96
GTF3A-204ENST00000438571 ARNTL2Q8WYA1 636 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 SPATA33Q96N06 139 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 ASB2Q96Q27 587 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 KATNAL1Q9BW62 490 aa21.05■□□□□ 0.96
GTF3A-204ENST00000438571 MAP3K20Q9NYL2 800 aaKnown RBP21.05■□□□□ 0.96
GTF3A-204ENST00000438571 RBM8AQ9Y5S9 174 aaKnown RBP21.05■□□□□ 0.96
GTF3A-204ENST00000438571 FRMPD4Q14CM0 1322 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 ERICH2A1L162 156 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 GCOM1H8Y6P7 765 aaPredicted RBP21.04■□□□□ 0.96
GTF3A-204ENST00000438571 BAIAP3O94812 1187 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 CXCL10P02778 98 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 POLR2MP0CAP2 368 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 CCND2P30279 289 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 MRPS9P82933 396 aaKnown RBP21.04■□□□□ 0.96
GTF3A-204ENST00000438571 SEMA3FQ13275 785 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 ZNF618Q5T7W0 954 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 IGDCC4Q8TDY8 1250 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 C16orf70Q9BSU1 422 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 MTCH2Q9Y6C9 303 aa21.04■□□□□ 0.96
GTF3A-204ENST00000438571 PNMA6FA0A0J9YX94 578 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 TFF2Q03403 129 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 PTK7Q13308 1070 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 CNKSR3Q6P9H4 555 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 MAP4K1Q92918 833 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 LY9Q9HBG7 655 aa21.03■□□□□ 0.96
GTF3A-204ENST00000438571 TLL1O43897 1013 aa21.02■□□□□ 0.96
GTF3A-204ENST00000438571 KCNJ6P48051 423 aa21.02■□□□□ 0.96
GTF3A-204ENST00000438571 ZNF654Q8IZM8 581 aa21.02■□□□□ 0.96
GTF3A-204ENST00000438571 SAMD3Q8N6K7 520 aa21.02■□□□□ 0.96
GTF3A-204ENST00000438571 ADAMTS19Q8TE59 1207 aa21.02■□□□□ 0.96
GTF3A-204ENST00000438571 TNFRSF10AO00220 468 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 PLEKHA8P1O95397 391 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 LGALS2P05162 132 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 RXRAP19793 462 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 MRPS5P82675 430 aaKnown RBP21.01■□□□□ 0.95
GTF3A-204ENST00000438571 CATIPQ7Z7H3 387 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 RAB11FIP4Q86YS3 637 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 NECAB3Q96P71 396 aaPredicted RBP21.01■□□□□ 0.95
GTF3A-204ENST00000438571 OSBPL7Q9BZF2 842 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 MLXIPQ9HAP2 919 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 RALGAPA2Q2PPJ7 1873 aa21.01■□□□□ 0.95
GTF3A-204ENST00000438571 LPXNO60711 386 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 PPFIA4O75335 1185 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 GRB10Q13322 594 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 SART3Q15020 963 aaKnown RBP21■□□□□ 0.95
GTF3A-204ENST00000438571 KCNV1Q6PIU1 500 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 USP17L6PQ6QN14 398 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 SKAP1Q86WV1 359 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 TRIM50Q86XT4 487 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 CMTR1Q8N1G2 835 aaKnown RBP21■□□□□ 0.95
GTF3A-204ENST00000438571 GDPD5Q8WTR4 605 aa21■□□□□ 0.95
GTF3A-204ENST00000438571 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
GTF3A-204ENST00000438571 KCNQ1P51787 676 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms