RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 PEX11GQ96HA9 241 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 ALG1Q9BT22 464 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 EPB41L4AQ9HCS5 686 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 CLDND1Q9NY35 253 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 NDOR1Q9UHB4 597 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 TRAF6Q9Y4K3 522 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 TCAF2A6NFQ2 919 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 NPIPB6E9PJ23 425 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 KCNQ2O43526 872 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 ATF2P15336 505 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 IGFBP6P24592 240 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 HSD3B2P26439 372 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 SSPNQ14714 243 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 TAF7LQ5H9L4 462 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 MROH9Q5TGP6 573 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 MTDHQ86UE4 582 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 TMEFF1Q8IYR6 380 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 GSTCDQ8NEC7 633 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 PANK1Q8TE04 598 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 CHAMP1Q96JM3 812 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 FEZ1Q99689 392 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 JAM3Q9BX67 310 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 SLC52A2Q9HAB3 445 aa5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 DBR1Q9UK59 544 aaKnown RBP5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 COA3Q9Y2R0 106 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-204ENST00000438419 RFPL3O75679 317 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 ASGR2P07307 311 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 SLC6A11P48066 632 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 KCNA10Q16322 511 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 PLEKHG4Q58EX7 1191 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 ANKLE2Q86XL3 938 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 C1QL4Q86Z23 238 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 NUDT5Q9UKK9 219 aa5.37□□□□□ -1.55
TRAPPC13-204ENST00000438419 PPP1R12AO14974 1030 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 SMARCA5O60264 1052 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 BUB1BO60566 1050 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 TADA3O75528 432 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 CLSTN1O94985 981 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 ZBTB7AO95365 584 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 RAPGEF3O95398 923 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 GRK2P25098 689 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 CFPP27918 469 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 PMLP29590 882 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 GRK3P35626 688 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 MC3RP41968 323 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 LINC00310P59036 64 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 GUCY1A3Q02108 690 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 PAK1Q13153 545 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 SLC9A5Q14940 896 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 BRAPQ7Z569 592 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 KIAA0907Q7Z7F0 614 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 DCP2Q8IU60 420 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 SEC14L1Q92503 715 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 ALG3Q92685 438 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 SIGLEC10Q96LC7 697 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 EPB41L1Q9H4G0 881 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 PALD1Q9ULE6 856 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 PLAAQ9Y263 795 aa5.36□□□□□ -1.55
TRAPPC13-204ENST00000438419 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 FAM47E-STBD1D6RA91 191 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 ARVCFO00192 962 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 DGKIO75912 1065 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 CRTAMO95727 393 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 SOD2P04179 222 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 PABPC4Q13310 644 aaKnown RBP eCLIP5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 CHRNA2Q15822 529 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 TKFCQ3LXA3 575 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 SLC7A14Q8TBB6 771 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 MAGEB10Q96LZ2 347 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 SLKQ9H2G2 1235 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 TRIM39Q9HCM9 518 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 KCTD3Q9Y597 815 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 IRAK3Q9Y616 596 aa5.35□□□□□ -1.55
TRAPPC13-204ENST00000438419 PI3P19957 117 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 TARBP2Q15633 366 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 EMC4Q5J8M3 183 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 MILR1Q7Z6M3 343 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 FAM129CQ86XR2 697 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 IPPKQ9H8X2 491 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 CNOT6Q9ULM6 557 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 PCDHA8Q9Y5H6 950 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 CD2APQ9Y5K6 639 aa5.34□□□□□ -1.55
TRAPPC13-204ENST00000438419 B4E1Z4 1266 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 WNT9AO14904 365 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 HGSO14964 777 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 RASGRP1O95267 797 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 NCAM1P13591 858 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 LIMS1P48059 325 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 HABP4Q5JVS0 413 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 STEAP3Q658P3 488 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 AMIGO3Q86WK7 504 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 MIB1Q86YT6 1006 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 LRRC56Q8IYG6 542 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 PCDH19Q8TAB3 1148 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 PIP4K2CQ8TBX8 421 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms