RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 SAP30BPQ9UHR5 308 aaKnown RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 KCNK3O14649 394 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 ITGA4P13612 1032 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 IFFO1Q0D2I5 559 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 RCSD1Q6JBY9 416 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
SCAF4-203ENST00000434667 DPH5Q9H2P9 285 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 SLC40A1Q9NP59 571 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
SCAF4-203ENST00000434667 ANO9A1A5B4 782 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 MYMKA6NI61 221 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
SCAF4-203ENST00000434667 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 RAPGEF1Q13905 1077 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 CCDC40Q4G0X9 1142 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 FAM133AQ8N9E0 248 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-203ENST00000434667 N4BP2L2Q92802 583 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-203ENST00000434667 ACSBG1Q96GR2 724 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 EPN3Q9H201 632 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 KLC4Q9NSK0 619 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 PNPLA7Q6ZV29 1317 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 A0A087X0T9 212 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 NPHP3-ACAD11A0A0J9YXS1 232 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 UPP2O95045 317 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 KIF4AO95239 1232 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 FAM228BP0C875 321 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 PPP2R5AQ15172 486 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 ZFYVE27Q5T4F4 411 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 CCDC170Q8IYT3 715 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 ALS2CR12Q96Q35 445 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 GNAT2P19087 354 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 IQCEQ6IPM2 695 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 FAM228AQ86W67 206 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 FNBP4Q8N3X1 1017 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-203ENST00000434667 BCAS3Q9H6U6 928 aa11.53□□□□□ -0.56
SCAF4-203ENST00000434667 MROH5Q6ZUA9 1318 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.56
SCAF4-203ENST00000434667 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.56
SCAF4-203ENST00000434667 ATP6V1AP38606 617 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.56
SCAF4-203ENST00000434667 KCNMA1Q12791 1236 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.56
SCAF4-203ENST00000434667 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.56
SCAF4-203ENST00000434667 BCS1LQ9Y276 419 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.56
SCAF4-203ENST00000434667 CEP104O60308 925 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 BMP15O95972 392 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 GSCP56915 257 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 UAP1Q16222 522 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 KIAA0753Q2KHM9 967 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 SWT1Q5T5J6 900 aaKnown RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 PNMA1Q8ND90 353 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 BAP1Q92560 729 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 PCDHA4Q9UN74 947 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 FLT1P17948 1338 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 CLEC10AQ8IUN9 316 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 NOX5Q96PH1 765 aa11.52□□□□□ -0.57
SCAF4-203ENST00000434667 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCAF4-203ENST00000434667 PAX7P23759 505 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 HSD17B3P37058 310 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 SKOR1P84550 965 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 MECOMQ03112 1051 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 ACCSLQ4AC99 568 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 CFAP221Q4G0U5 840 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 IFT20Q8IY31 132 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 DYDC1Q8WWB3 177 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 ATP6V1G3Q96LB4 118 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 LSM14BQ9BX40 385 aaKnown RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 RBM28Q9NW13 759 aaKnown RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 FOXO6A8MYZ6 492 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 TCP1P17987 556 aaKnown RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 PSEN1P49768 467 aa11.51□□□□□ -0.57
SCAF4-203ENST00000434667 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-203ENST00000434667 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms