RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 TM6SF1Q9BZW5 370 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 BARHL2Q9NY43 387 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 SPATA31C2B4DYI2 1134 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 KPNA6O60684 536 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 ZNF286BP0CG31 522 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 FPGSQ05932 587 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 LAMC2Q13753 1193 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 PKN1Q16512 942 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 MFSD5Q6N075 450 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 DHX37Q8IY37 1157 aaKnown RBP20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 VWCEQ96DN2 955 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 SEZ6LQ9BYH1 1024 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 WNT8AQ9H1J5 351 aa20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 NCOA5Q9HCD5 579 aaKnown RBP20.8■□□□□ 0.92
SSR4P1-202ENST00000429427 TGFB3P10600 412 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 CYP2C9P11712 490 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 CSF2RAP15509 400 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 ITGB5P18084 799 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 NAPAP54920 295 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 PFKFB3Q16875 520 aaPredicted RBP20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 PPP1R18Q6NYC8 613 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 NFRKBQ6P4R8 1299 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 PHKBQ93100 1093 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 RIC8AQ9NPQ8 531 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 PCDHA6Q9UN73 950 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 PCDHA8Q9Y5H6 950 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 CYP46A1Q9Y6A2 500 aa20.79■□□□□ 0.92
SSR4P1-202ENST00000429427 RBAK-RBAKDNI3L0D1 243 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 STAM2O75886 525 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 SEC24BO95487 1268 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 F2P00734 622 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 DGKDQ16760 1214 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 XRRA1Q6P2D8 792 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 PGBD1Q96JS3 809 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 SPATA33Q96N06 139 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 HIPK3Q9H422 1215 aa20.78■□□□□ 0.92
SSR4P1-202ENST00000429427 MYH7BA7E2Y1 1941 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 CCDC196A0A1B0GTZ2 297 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 hCG_1984214I3L0E3 225 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 HAS3O00219 553 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 FIBPO43427 364 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 SCG2P13521 617 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 CLK2P49760 499 aaKnown RBP20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 CCT2P78371 535 aaKnown RBP20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 ZNF713Q8N859 430 aaPredicted RBP20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 C16orf70Q9BSU1 422 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 TMEM260Q9NX78 707 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 UBIAD1Q9Y5Z9 338 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
SSR4P1-202ENST00000429427 SMCO2A6NFE2 343 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 PRPF3O43395 683 aaKnown RBP20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 ATP9AO75110 1047 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 ADCY7P51828 1080 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 CHMP4BP1P59074 171 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 HIC1Q14526 733 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 GNPTABQ3T906 1256 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 FAM47CQ5HY64 1035 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 SESTD1Q86VW0 696 aa20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.76■□□□□ 0.91
SSR4P1-202ENST00000429427 CDH23Q9H251 3354 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 SPDYE3A6NKU9 549 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 ACRP10323 421 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 KCNA2P16389 499 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 IFNAR1P17181 557 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 PSEN2P49810 448 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 CCL23P55773 120 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 PTPN11Q06124 597 aaPredicted RBP20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 TMEM240Q5SV17 173 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 GDF6Q6KF10 455 aaPredicted RBP20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 METTL7BQ6UX53 244 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 CYFIP1Q7L576 1253 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 CYP2W1Q8TAV3 490 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 IL17RAQ96F46 866 aa20.75■□□□□ 0.91
SSR4P1-202ENST00000429427 PPFIA4O75335 1185 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 MFSD10Q14728 455 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 Q7L0L9 218 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 DHX38Q92620 1227 aaKnown RBP20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 GPRASP2Q96D09 838 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 SCLYQ96I15 445 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 GPR20Q99678 358 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 ANO3Q9BYT9 981 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 MLXIPQ9HAP2 919 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 PDRG1Q9NUG6 133 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 HDAC6Q9UBN7 1215 aa20.74■□□□□ 0.91
SSR4P1-202ENST00000429427 ESYT2A0FGR8 921 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 NEDD9Q14511 834 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 KIAA0753Q2KHM9 967 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 TMEM199Q8N511 208 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 ZNF274Q96GC6 653 aaPredicted RBP20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 SENP7Q9BQF6 1050 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 ALG1Q9BT22 464 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 SLC26A6Q9BXS9 759 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 RNF26Q9BY78 433 aaPredicted RBP20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 ZMYND12Q9H0C1 365 aa20.73■□□□□ 0.91
SSR4P1-202ENST00000429427 GTF2IRD1Q9UHL9 959 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms